| MirGeneDB ID | Mml-Mir-486 |
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| Family name |
MIR-486 (all species) |
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| Seed |
CCUGUAC |
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| Species |
Rhesus monkey (Macaca mulatta) |
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| MiRBase ID |
mml-mir-486
|
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| Paralogues |
Mml-Mir-486-as
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| Orthologues |
Bta-Mir-486
Cfa-Mir-486
Cpo-Mir-486
Dno-Mir-486
Ete-Mir-486
Hsa-Mir-486
Mmu-Mir-486
Ocu-Mir-486
Rno-Mir-486
|
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| Node of Origin (locus) |
Eutheria
|
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| Node of Origin (family) |
Eutheria
|
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Genome context
(rheMac8_trace) |
chr8: 43115016-43115079 [+]
UCSC
Ensembl
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Precursor
(pre-Mir +30nt flank) |
CCGGCUCUGAUCUCCAUCCUCCCUGGGGCAUCCUGUACUGAGCUGCCCCGAGGCCCUUCAUGCUGCCCAGCUCGGGGCAGCUCAGUACAGGAUACCUCGGGGUGGGAGUCAGCAGGAGGUGAGG
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
CCGGCUCUGAUCUCCAU--| U C GCCCUUCA
CC CCCUGGGG AUCCUGUACUGAGCUGCCCCGAG U
GG GGGGCUCC UAGGACAUGACUCGACGGGGCUC G
GGAGUGGAGGACGACUGAG^ U A GACCCGUC
120 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
|
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| Comment | Mir-486 is palindromic. This orientation is 5'-3' with respect to the host gene, as well as rabbit and cow where the mature and star sequences differ. |
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| 3' NTU |
No
|
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
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| Bo |
Br |
Br |
Br |
He |
Ki |
Li |
Lu |
Ly |
Sk |
Sp |
Te |
Th |
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| Mature sequence |
Mml-Mir-486_5p |
| mirBase accession | MIMAT0006344 |
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| Sequence |
0- UCCUGUACUGAGCUGCCCCGAG -22
Get sequence
|
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| Proposed targets |
TargetScanVert: mml-miR-486-5p
|
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| Star sequence |
Mml-Mir-486_3p* |
| mirBase accession | MIMAT0006345 |
|---|
| Sequence |
42- CGGGGCAGCUCAGUACAGGAUA -64
Get sequence
|
|---|
| Proposed targets |
TargetScanVert: mml-miR-486-3p
|
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