MirGeneDB 3.0
MirGeneDB ID

Ete-Mir-486

Family name MIR-486 (all species)
Seed CCUGUAC
Species Lesser hedgehog tenrec (Echinops telfairi)
MiRBase ID
Paralogues
Orthologues Bta-Mir-486  Cfa-Mir-486  Cja-Mir-486  Cpo-Mir-486  Dno-Mir-486  Eca-Mir-486  Hsa-Mir-486  Laf-Mir-486  Mml-Mir-486  Mml-Mir-486-as  Mmr-Mir-486  Mmu-Mir-486  Ocu-Mir-486  Pab-Mir-486  Rno-Mir-486 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(echTel2)		 JH980320: 3093896-3093959 [-] UCSC
Precursor
(pre-Mir +30nt flank)
CCCGCUCUGGUCUCCGUCCUCCCUGAGGGAUCCUGUACUGAGCUGCCCCGAGGUCCUUCUUUGAGCCCAGCUCGGGGCAGCUCAGUACAGGAUGCGUCGGGGUGGGAGUCGGCAGGAAGCCAGG
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Structure
        10          20        30        40        50        60 
CCCGCUCUGGUCUCCGU--| U      GGG                       GUCCUUCU 
                   CC CCCUGA   AUCCUGUACUGAGCUGCCCCGAG        U
                   GG GGGGCU   UAGGACAUGACUCGACGGGGCUC        U
GGACCGAAGGACGGCUGAG^ U      GCG                       GACCCGAG 
  120       110       100        90        80        70
Deep sequencing
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CommentMir-486 is palindromic. This orientation is 5'-3' with respect to the host gene, as well as rabbit and cow where the mature and star sequences differ.
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
To
Mature sequence

Ete-Mir-486_5p
mirBase accessionNone
Sequence 
0- UCCUGUACUGAGCUGCCCCGAG -22
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Star sequence

Ete-Mir-486_3p*
mirBase accessionNone
Sequence 
42- CGGGGCAGCUCAGUACAGGAUG -64
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