MirGeneDB 3.0
MirGeneDB ID

Laf-Mir-486

Family name MIR-486 (all species)
Seed CCUGUAC
Species African bush elephant (Loxodonta africana)
MiRBase ID
Paralogues
Orthologues Bta-Mir-486  Cfa-Mir-486  Cja-Mir-486  Cpo-Mir-486  Dno-Mir-486  Eca-Mir-486  Ete-Mir-486  Hsa-Mir-486  Mml-Mir-486  Mml-Mir-486-as  Mmr-Mir-486  Mmu-Mir-486  Ocu-Mir-486  Pab-Mir-486  Rno-Mir-486 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_000001905.1_Loxafr3.0)		 GL010049.1: 20736288-20736350 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CCAGCUCUGGUCUCCGUCCUCCCUGAUGGAUCCUGUACUGAGCUGCCCCGAGGCCCUUCAUUGUGCCCAGCUCGGGGCAGCUCAGUACAGGAUGCAUCGGGGUGGGAGUCAGCAGGACGCAAG
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Structure
        10         20        30        40        50        60 
CCAGCUCUGGUCUCCGU-| U        G                       GCCCUUCA 
                  CC CCCUGAUG AUCCUGUACUGAGCUGCCCCGAG        U
                  GG GGGGCUAC UAGGACAUGACUCGACGGGGCUC        U
GAACGCAGGACGACUGAG^ U        G                       GACCCGUG 
 120       110       100        90        80        70
Deep sequencing
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CommentMir-486 is palindromic. This orientation is 5'-3' with respect to the host gene, as well as rabbit and cow where the mature and star sequences differ.
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Wh
Mature sequence

Laf-Mir-486_5p
mirBase accessionNone
Sequence 
0- UCCUGUACUGAGCUGCCCCGAG -22
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Star sequence

Laf-Mir-486_3p*
mirBase accessionNone
Sequence 
42- CGGGGCAGCUCAGUACAGGAU -63
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