| MirGeneDB ID | Cfa-Mir-6715 |
|---|
| Family name |
MIR-6715 (all species) |
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| Seed |
CAGGCAC |
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| Species |
Dog (Canis familiaris) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
Bta-Mir-6715
Cpo-Mir-6715
Ete-Mir-6715
Hsa-Mir-6715
Mml-Mir-6715
Mmu-Mir-6715
Ocu-Mir-6715
Rno-Mir-6715
|
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| Node of Origin (locus) |
Eutheria
|
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| Node of Origin (family) |
Eutheria
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Genome context
(canFam3_add) |
chr28: 23373855-23373911 [+]
UCSC
Ensembl
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Precursor
(pre-Mir +30nt flank) |
CAGAGGUUGAAUUCACUCUGGGCUGCGUCCACAGGCACAGCCGCUUUGAGCAUUUUCACUGAAUUGCCAAACCAGUUGUGCCUGUAGACACUACCCUCACCUGCGACUCAAGGCUUC
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
CAGAGGUUGAAUUCACUCU--| CUGC C CGC A UUUUC
GGG GUC ACAGGCACAGC UUUG GCA A
CCC CAG UGUCCGUGUUG AAAC CGU C
CUUCGGAACUCAGCGUCCACU^ AUCA A ACC - UAAGU
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
| Bl |
Ce |
Co |
He |
Hy |
Ki |
Ki |
Li |
Lu |
Ov |
Sk |
Te |
Te |
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| Mature sequence |
Cfa-Mir-6715_5p |
| mirBase accession | None |
|---|
| Sequence |
0- ACAGGCACAGCCGCUUUGAGCA -22
Get sequence
|
|---|
| Co-mature sequence |
Cfa-Mir-6715_3p |
| mirBase accession | None |
|---|
| Sequence |
36- CCAAACCAGUUGUGCCUGUAG -57
Get sequence
|
|---|
