| MirGeneDB ID | Laf-Mir-6715 |
|---|---|
| Family name | MIR-6715 (all species) |
| Seed | CAGGCAC |
| Species | African bush elephant (Loxodonta africana) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Bta-Mir-6715 Cfa-Mir-6715 Cja-Mir-6715 Cpo-Mir-6715 Eca-Mir-6715 Ete-Mir-6715 Hsa-Mir-6715 Mml-Mir-6715 Mmr-Mir-6715 Mmu-Mir-6715 Ocu-Mir-6715 Pab-Mir-6715 Rno-Mir-6715 |
| Node of Origin (locus) | Eutheria |
| Node of Origin (family) | Eutheria |
| Genome context (GCA_000001905.1_Loxafr3.0) |
GL010037.1: 6782074-6782129 [-] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | AUGGUUUGUGUCCACUCCUGGGCUGUGUCCACAGGCACAGCGGGUUCGAGCAUUUGACUGAAUUGCCAAACCAGUUGUUCCUGUAGCCACAGCCUUUACCUGCUCCUGAGUCCUCCGet precursor sequence |
| Structure | 10 20 30 40 50 AUGGUUUGUGUCCACUCCU--| UCC C G CGA UUUGA GGGCUGUG ACAGG ACAGC GGUU GCA \ UCCGACAC UGUCC UGUUG CCAA CGU C CCUCCUGAGUCCUCGUCCAUU^ CGA U A AC- UAAGU 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | CNNC at 3p(+17) |
| Mature sequence | Laf-Mir-6715_5p (predicted) |
| mirBase accession | None |
| Sequence |
0- ACAGGCACAGCGGGUUCGAGCA -22
Get sequence
|
| Co-mature sequence | Laf-Mir-6715_3p (predicted) |
| mirBase accession | None |
| Sequence |
35- CCAAACCAGUUGUUCCUGUAG -56
Get sequence
|
