MirGeneDB 3.0
MirGeneDB ID

Cja-Mir-6715

Family name MIR-6715 (all species)
Seed CAAACCA
Species White-tufted-ear marmoset (Callithrix jacchus)
MiRBase ID
Paralogues
Orthologues Bta-Mir-6715  Cfa-Mir-6715  Cpo-Mir-6715  Eca-Mir-6715  Ete-Mir-6715  Hsa-Mir-6715  Laf-Mir-6715  Mml-Mir-6715  Mmr-Mir-6715  Mmu-Mir-6715  Ocu-Mir-6715  Pab-Mir-6715  Rno-Mir-6715 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_011100555.2_mCalJa1.2.pat.X_genomic)		 CM021926.1: 101898494-101898550 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AAAUAGUUGAGCUCACUCUGGGCUGCGUCCACAGGCACAGCCGGUUUGAGCAUUUUCACUGAAUUGCCAAACCAGUUGUGCCUGUGGGCACAACCUUCACCUGCUCCUGGAAUCUUC
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Structure
        10          20        30        40        50        
AAAUAGUUGAGCUCACUCU--|  C  C               C      A   UUUUC 
                     GGG UG GUCCACAGGCACAGC GGUUUG GCA     A
                     UCC AC CGGGUGUCCGUGUUG CCAAAC CGU     C
CUUCUAAGGUCCUCGUCCACU^  A  A               A      -   UAAGU 
     110       100        90        80        70         60
Deep sequencing
3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
-   +
To
Star sequence

Cja-Mir-6715_5p* (predicted)
mirBase accessionNone
Sequence 
0- ACAGGCACAGCCGGUUUGAGCA -22
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Mature sequence

Cja-Mir-6715_3p (predicted)
mirBase accessionNone
Sequence 
36- CCAAACCAGUUGUGCCUGUGG -57
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