| MirGeneDB ID | Cja-Mir-6715 |
|---|---|
| Family name | MIR-6715 (all species) |
| Seed | CAAACCA |
| Species | White-tufted-ear marmoset (Callithrix jacchus) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Bta-Mir-6715 Cfa-Mir-6715 Cpo-Mir-6715 Eca-Mir-6715 Ete-Mir-6715 Hsa-Mir-6715 Laf-Mir-6715 Mml-Mir-6715 Mmr-Mir-6715 Mmu-Mir-6715 Ocu-Mir-6715 Pab-Mir-6715 Rno-Mir-6715 |
| Node of Origin (locus) | Eutheria |
| Node of Origin (family) | Eutheria |
| Genome context (GCA_011100555.2_mCalJa1.2.pat.X_genomic) |
CM021926.1: 101898494-101898550 [+] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | AAAUAGUUGAGCUCACUCUGGGCUGCGUCCACAGGCACAGCCGGUUUGAGCAUUUUCACUGAAUUGCCAAACCAGUUGUGCCUGUGGGCACAACCUUCACCUGCUCCUGGAAUCUUCGet precursor sequence |
| Structure | 10 20 30 40 50 AAAUAGUUGAGCUCACUCU--| C C C A UUUUC GGG UG GUCCACAGGCACAGC GGUUUG GCA A UCC AC CGGGUGUCCGUGUUG CCAAAC CGU C CUUCUAAGGUCCUCGUCCACU^ A A A - UAAGU 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | CNNC at 3p(+17) |
| Star sequence | Cja-Mir-6715_5p* (predicted) |
| mirBase accession | None |
| Sequence |
0- ACAGGCACAGCCGGUUUGAGCA -22
Get sequence
|
| Mature sequence | Cja-Mir-6715_3p (predicted) |
| mirBase accession | None |
| Sequence |
36- CCAAACCAGUUGUGCCUGUGG -57
Get sequence
|
