MirGeneDB 2.1

MirGeneDB ID

Ete-Mir-6715

Family name MIR-6715 (all species)
Seed CAGGCAC
Species Lesser hedgehog tenrec (Echinops telfairi)
MiRBase ID
Paralogues
Orthologues Bta-Mir-6715  Cfa-Mir-6715  Cpo-Mir-6715  Hsa-Mir-6715  Mml-Mir-6715  Mmu-Mir-6715  Ocu-Mir-6715  Rno-Mir-6715 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(echTel2)
JH980301: 17007898-17007954 [-] UCSC
Precursor
(pre-Mir +30nt flank)
AUGGUUUGCAUCCACUUCUGGGCUGCGUCCACAGGCACAGCUGGUUUGAGCAUUUUGACCGAAUUGCCAAACCACUCGUGCCUGGAGCCACAGCCUGCACCUGCUCCUGAGUCCUCU
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Structure
        10          20         30         40        50        
AUGGUUUGCAUCCACUUCU--      C-| CCA       -  C       A   UUUUG 
                     GGGCUG  GU   CAGGCAC AG UGGUUUG GCA     A
                     UCCGAC  CG   GUCCGUG UC ACCAAAC CGU     C
UCUCCUGAGUCCUCGUCCACG      AC^ AG-       C  -       -   UAAGC 
     110       100        90         80         70         60
Deep sequencing
3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
 +
To
Mature sequence

Ete-Mir-6715_5p (predicted)

mirBase accessionNone
Sequence
0- ACAGGCACAGCUGGUUUGAGCA -22
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Co-mature sequence

Ete-Mir-6715_3p (predicted)

mirBase accessionNone
Sequence
36- CCAAACCACUCGUGCCUGGAG -57
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