MirGeneDB ID | Ete-Mir-6715 |
Family name |
MIR-6715 (all species) |
Seed |
CAGGCAC |
Species |
Lesser hedgehog tenrec (Echinops telfairi) |
MiRBase ID |
|
Paralogues |
|
Orthologues |
Bta-Mir-6715
Cfa-Mir-6715
Cja-Mir-6715
Cpo-Mir-6715
Eca-Mir-6715
Hsa-Mir-6715
Laf-Mir-6715
Mml-Mir-6715
Mmr-Mir-6715
Mmu-Mir-6715
Ocu-Mir-6715
Pab-Mir-6715
Rno-Mir-6715
|
Node of Origin (locus) |
Eutheria
|
Node of Origin (family) |
Eutheria
|
Genome context (echTel2) |
JH980301: 17007898-17007954 [-]
UCSC
|
Precursor (pre-Mir +30nt flank) |
AUGGUUUGCAUCCACUUCUGGGCUGCGUCCACAGGCACAGCUGGUUUGAGCAUUUUGACCGAAUUGCCAAACCACUCGUGCCUGGAGCCACAGCCUGCACCUGCUCCUGAGUCCUCU
Get precursor sequence
|
Structure | 10 20 30 40 50
AUGGUUUGCAUCCACUUCU-- C-| CCA - C A UUUUG
GGGCUG GU CAGGCAC AG UGGUUUG GCA A
UCCGAC CG GUCCGUG UC ACCAAAC CGU C
UCUCCUGAGUCCUCGUCCACG AC^ AG- C - - UAAGC
110 100 90 80 70 60 |
Deep sequencing |
|
3' NTU |
Unknown
|
Motifs | CNNC at 3p(+17) |
Tissue expression
|
|
Mature sequence |
Ete-Mir-6715_5p (predicted) |
mirBase accession | None |
Sequence |
0- ACAGGCACAGCUGGUUUGAGCA -22
Get sequence
|
Co-mature sequence |
Ete-Mir-6715_3p (predicted) |
mirBase accession | None |
Sequence |
36- CCAAACCACUCGUGCCUGGAG -57
Get sequence
|