MirGeneDB 3.0

MirGeneDB ID

Ocu-Mir-6715

Family name MIR-6715 (all species)
Seed CAGGCAC
Species Rabbit (Oryctolagus cuniculus)
MiRBase ID
Paralogues
Orthologues Bta-Mir-6715  Cfa-Mir-6715  Cja-Mir-6715  Cpo-Mir-6715  Eca-Mir-6715  Ete-Mir-6715  Hsa-Mir-6715  Laf-Mir-6715  Mml-Mir-6715  Mmr-Mir-6715  Mmu-Mir-6715  Pab-Mir-6715  Rno-Mir-6715 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(oryCun2_add)
chr18: 59957230-59957286 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UCCCAAUGCCUGACGCUCUGGGCUGCGUCCACAGGCACGGCCGGUUUGAGCAUUUUGACUGAAUUGCCAAACCAGGUGUGCCUGUGGGCACAACCUUCGCCUGCUCCUCGAAUCUUC
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Structure
        10          20        30        40         50        
UCCCAAUGCCUGACGCUCU--|  C  C             G  -      A   UUUUG 
                     GGG UG GUCCACAGGCACG CC GGUUUG GCA     A
                     UCC AC CGGGUGUCCGUGU GG CCAAAC CGU     C
CUUCUAAGCUCCUCGUCCGCU^  A  A             -  A      -   UAAGU 
     110       100        90        80         70         60
Deep sequencing
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3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
 +
He Ki Te To Wh
Mature sequence

Ocu-Mir-6715_5p

mirBase accessionNone
Sequence
0- ACAGGCACGGCCGGUUUGAGCA -22
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Star sequence

Ocu-Mir-6715_3p* (predicted)

mirBase accessionNone
Sequence
36- CCAAACCAGGUGUGCCUGUGG -57
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