MirGeneDB 3.0

MirGeneDB ID

Mmu-Mir-6715

Family name MIR-6715 (all species)
Seed CAGGCAC
Species House mouse (Mus musculus)
MiRBase ID mmu-mir-6715
Paralogues
Orthologues Bta-Mir-6715  Cfa-Mir-6715  Cja-Mir-6715  Cpo-Mir-6715  Eca-Mir-6715  Ete-Mir-6715  Hsa-Mir-6715  Laf-Mir-6715  Mml-Mir-6715  Mmr-Mir-6715  Ocu-Mir-6715  Pab-Mir-6715  Rno-Mir-6715 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(mm10)
chr19: 55192678-55192734 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GCCCAAUAUGUGUACUCCUGGGCUGUGUCCACAGGCACCACAGGUUUGAGCAUUUUGAUUGAAUUGCCAAACCAGGCGUGCCUGUGGACACAGCACUCACGGGCUCCUUGAGUGCCG
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Structure
        10        20          30        40        50        
GCCCAAUAUGUGUACUCCUGG--|                CACA      A   UUUUG 
                       GCUGUGUCCACAGGCAC    GGUUUG GCA     A
                       CGACACAGGUGUCCGUG    CCAAAC CGU     U
GCCGUGAGUUCCUCGGGCACUCA^                CGGA      -   UAAGU 
     110       100        90        80        70         60
Deep sequencing
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3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
 +
Br Br Ce Ce Em Em He Ki Li Lu Ov Pa Sk Sp Te
Mature sequence

Mmu-Mir-6715_5p

mirBase accessionMIMAT0029876
Sequence
0- ACAGGCACCACAGGUUUGAGCA -22
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Proposed targets TargetScanVert: mmu-miR-6715-5p
miRDB: MIMAT0029876
Star sequence

Mmu-Mir-6715_3p* (predicted)

mirBase accessionMIMAT0029877
Sequence
36- CCAAACCAGGCGUGCCUGUGG -57
Get sequence
Proposed targets TargetScanVert: mmu-miR-6715-3p
miRDB: MIMAT0029877