MirGeneDB ID | Mmr-Mir-6715 |
Family name |
MIR-6715 (all species) |
Seed |
CAGGCAC |
Species |
Gray mouse lemur (Microcebus murinus) |
MiRBase ID |
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Paralogues |
|
Orthologues |
Bta-Mir-6715
Cfa-Mir-6715
Cja-Mir-6715
Cpo-Mir-6715
Eca-Mir-6715
Ete-Mir-6715
Hsa-Mir-6715
Laf-Mir-6715
Mml-Mir-6715
Mmu-Mir-6715
Ocu-Mir-6715
Pab-Mir-6715
Rno-Mir-6715
|
Node of Origin (locus) |
Eutheria
|
Node of Origin (family) |
Eutheria
|
Genome context (GCA_000165445.3_Mmur_3.0_genomic) |
CM007675.1: 59838270-59838326 [+]
UCSC
Ensembl
|
Precursor (pre-Mir +30nt flank) |
AAACGGUUGCCUUCACUCUGGGCUGCGUCCACAGGCACAGCCAGUUUGAGCAUUUUGACCGAAUUGCCAAACCAGCUGUGCCUGUAGGCACAACCUUCACCUGCUCCUCGAGCGCUC
Get precursor sequence
|
Structure | 10 20 30 40 50
AAACGGUUGCCUUCACUCU--| C C C CA A AUUUUG
GGG UG GUC ACAGGCACAGC GUUUG GC A
UCC AC CGG UGUCCGUGUCG CAAAC CG C
CUCGCGAGCUCCUCGUCCACU^ A A A AC - UUAAGC
110 100 90 80 70 60 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
Unknown
|
Motifs | CNNC at 3p(+17) |
Tissue expression
|
|
Mature sequence |
Mmr-Mir-6715_5p |
mirBase accession | None |
Sequence |
0- ACAGGCACAGCCAGUUUGAGC -21
Get sequence
|
Star sequence |
Mmr-Mir-6715_3p* |
mirBase accession | None |
Sequence |
36- CCAAACCAGCUGUGCCUGUAG -57
Get sequence
|