MirGeneDB 3.0

MirGeneDB ID

Cpo-Mir-6715

Family name MIR-6715 (all species)
Seed CAAACCA
Species Guinea pig (Cavia porcellus)
MiRBase ID
Paralogues
Orthologues Bta-Mir-6715  Cfa-Mir-6715  Cja-Mir-6715  Eca-Mir-6715  Ete-Mir-6715  Hsa-Mir-6715  Laf-Mir-6715  Mml-Mir-6715  Mmr-Mir-6715  Mmu-Mir-6715  Ocu-Mir-6715  Pab-Mir-6715  Rno-Mir-6715 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(cavPor3)
scaffold_11: 3327782-3327838 [-] UCSC
Precursor
(pre-Mir +30nt flank)
UUCCGUGGUUGCCUGCACUGGGCUGUGUUCACAGGCACGGCCGGUUUGAGCAUUUUCACUGAAUUGCCAAACCAGGCGUGCCUGUGGCCACAACUCUCACCUGCGCCCGCCGAGUCU
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Structure
        10          20        30        40         50        
UUCCGUGGUUGCCUGCACU--|  C    UU          G  -      A   UUUUC 
                     GGG UGUG  CACAGGCACG CC GGUUUG GCA     A
                     CUC ACAC  GUGUCCGUGC GG CCAAAC CGU     C
UCUGAGCCGCCCGCGUCCACU^  A    CG          -  A      -   UAAGU 
     110       100        90        80         70         60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
Bl Bl Bl Bl Oo Oo Oo Oo To Wh
Star sequence

Cpo-Mir-6715_5p* (predicted)

mirBase accessionNone
Sequence
0- ACAGGCACGGCCGGUUUGAGCA -22
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Mature sequence

Cpo-Mir-6715_3p

mirBase accessionNone
Sequence
36- CCAAACCAGGCGUGCCUGUGG -57
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