| MirGeneDB ID | Cja-Mir-421-P2 |
|---|---|
| Family name | MIR-421 (all species) |
| Seed | UCAACAG |
| Species | White-tufted-ear marmoset (Callithrix jacchus) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Bta-Mir-421-P2 Cfa-Mir-421-P2 Eca-Mir-421-P2 Hsa-Mir-421-P2 Laf-Mir-421-P2 Mml-Mir-421-P2 Mmu-Mir-421-P2 Ocu-Mir-421-P2 Pab-Mir-421-P2 Rno-Mir-421-P2 |
| Node of Origin (locus) | Eutheria |
| Node of Origin (family) | Eutheria |
| Genome context (GCA_011100555.2_mCalJa1.2.pat.X_genomic) |
CM021937.1: 68669315-68669370 [-] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | GCAGUGCCUAAUCCGGUGCACAUUGUAGGCCUCAUUAAAUGUUUGUUGAAUGAAAAAAUGAAUCAUCAACAGACAUUAAUUGGGCGCCUGCUCUGUGAUCUCCAUGGGCUCAGCUUGet precursor sequence |
| Structure | 10 20 30 40 50 GCAGUGCCUAAUCCGGUG- UU -| UUA A AAAA CACA GUAGGC CUCA AAUGUUUGUUGA UGA \ GUGU CGUCCG GGGU UUACAGACAACU ACU A UUCGACUCGGGUACCUCUA CU C^ UAA - AAGU 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | No |
| Motifs | UG at 5p(-14) |
| Star sequence | Cja-Mir-421-P2_5p* |
| mirBase accession | None |
| Sequence |
0- CUCAUUAAAUGUUUGUUGAAUGA -23
Get sequence
|
| Mature sequence | Cja-Mir-421-P2_3p |
| mirBase accession | None |
| Sequence |
34- AUCAACAGACAUUAAUUGGGCG -56
Get sequence
|
