MirGeneDB 3.0
MirGeneDB ID

Cja-Mir-421-P2

Family name MIR-421 (all species)
Seed UCAACAG
Species White-tufted-ear marmoset (Callithrix jacchus)
MiRBase ID
Paralogues
Orthologues Bta-Mir-421-P2  Cfa-Mir-421-P2  Eca-Mir-421-P2  Hsa-Mir-421-P2  Laf-Mir-421-P2  Mml-Mir-421-P2  Mmu-Mir-421-P2  Ocu-Mir-421-P2  Pab-Mir-421-P2  Rno-Mir-421-P2 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_011100555.2_mCalJa1.2.pat.X_genomic)		 CM021937.1: 68669315-68669370 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GCAGUGCCUAAUCCGGUGCACAUUGUAGGCCUCAUUAAAUGUUUGUUGAAUGAAAAAAUGAAUCAUCAACAGACAUUAAUUGGGCGCCUGCUCUGUGAUCUCCAUGGGCUCAGCUU
Get precursor sequence
Structure
        10         20        30         40        50        
GCAGUGCCUAAUCCGGUG-    UU      -|   UUA            A   AAAA 
                   CACA  GUAGGC CUCA   AAUGUUUGUUGA UGA    \
                   GUGU  CGUCCG GGGU   UUACAGACAACU ACU    A
UUCGACUCGGGUACCUCUA    CU      C^   UAA            -   AAGU 
    110       100        90        80        70         60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsUG at 5p(-14)
Tissue expression
-   +
To
Star sequence

Cja-Mir-421-P2_5p*
mirBase accessionNone
Sequence 
0- CUCAUUAAAUGUUUGUUGAAUGA -23
Get sequence
Mature sequence

Cja-Mir-421-P2_3p
mirBase accessionNone
Sequence 
34- AUCAACAGACAUUAAUUGGGCG -56
Get sequence