| MirGeneDB ID | Pab-Mir-421-P2 |
|---|---|
| Family name | MIR-421 (all species) |
| Seed | UCAACAG |
| Species | Sumatran orangutan (Pongo abelii) |
| MiRBase ID | |
| Paralogues | Pab-Mir-421-P1 |
| Orthologues | Bta-Mir-421-P2 Cfa-Mir-421-P2 Cja-Mir-421-P2 Eca-Mir-421-P2 Hsa-Mir-421-P2 Laf-Mir-421-P2 Mml-Mir-421-P2 Mmu-Mir-421-P2 Ocu-Mir-421-P2 Rno-Mir-421-P2 |
| Node of Origin (locus) | Eutheria |
| Node of Origin (family) | Eutheria |
| Genome context (GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces) |
CM054702.2: 79135293-79135349 [-] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | GCAGUGCCUAAUCCGGUGCACAUUGUAGGCCUCAUUAAAUGUUUGUUGAAUGAAAAAAUGAAUCAUCAACAGACAUUAAUUGGGCGCCUGCUCUGUGAUCUCCAUGGGCUCAGCUUGGet precursor sequence |
| Structure | 10 20 30 40 50 GCAGUGCCUAAUCCGGUG-- UU -| UUA A AAAA CACA GUAGGC CUCA AAUGUUUGUUGA UGA \ GUGU CGUCCG GGGU UUACAGACAACU ACU A GUUCGACUCGGGUACCUCUA CU C^ UAA - AAGU 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | No |
| Motifs | UG at 5p(-14) |
| Star sequence | Pab-Mir-421-P2_5p* (predicted) |
| mirBase accession | None |
| Sequence |
0- CUCAUUAAAUGUUUGUUGAAUGA -23
Get sequence
|
| Mature sequence | Pab-Mir-421-P2_3p |
| mirBase accession | None |
| Sequence |
34- AUCAACAGACAUUAAUUGGGCGC -57
Get sequence
|
