| MirGeneDB ID | Laf-Mir-421-P2 |
|---|---|
| Family name | MIR-421 (all species) |
| Seed | UCAACAG |
| Species | African bush elephant (Loxodonta africana) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Bta-Mir-421-P2 Cfa-Mir-421-P2 Cja-Mir-421-P2 Eca-Mir-421-P2 Hsa-Mir-421-P2 Mml-Mir-421-P2 Mmu-Mir-421-P2 Ocu-Mir-421-P2 Pab-Mir-421-P2 Rno-Mir-421-P2 |
| Node of Origin (locus) | Eutheria |
| Node of Origin (family) | Eutheria |
| Genome context (GCA_000001905.1_Loxafr3.0) |
GL010051.1: 27592756-27592812 [+] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | CCCAGUGCCUAACCAGUGCACAUUGUAGGCCUCAUUAAAUGUUUGUUGAAUGAAAAAAUGAAUCAUCAACAGACAUUAAUUGGGCGCCUGCUCUGUGAUCUCCAAGGGCUCAGCUUGGet precursor sequence |
| Structure | 10 20 30 40 50 CCCAGUGCCUAACCAGUG-- UU -| UUA A AAAAA CACA GUAGGC CUCA AAUGUUUGUUGA UG \ GUGU CGUCCG GGGU UUACAGACAACU AC A GUUCGACUCGGGAACCUCUA CU C^ UAA - UAAGU 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | UG at 5p(-14) |
| Star sequence | Laf-Mir-421-P2_5p* (predicted) |
| mirBase accession | None |
| Sequence |
0- CUCAUUAAAUGUUUGUUGAAUG -22
Get sequence
|
| Mature sequence | Laf-Mir-421-P2_3p (predicted) |
| mirBase accession | None |
| Sequence |
34- AUCAACAGACAUUAAUUGGGCGC -57
Get sequence
|
