| MirGeneDB ID | Mml-Mir-421-P2 |
|---|---|
| Family name | MIR-421 (all species) |
| Seed | UCAACAG |
| Species | Rhesus monkey (Macaca mulatta) |
| MiRBase ID | mml-mir-421 |
| Paralogues | Mml-Mir-421-P1-v1 Mml-Mir-421-P1-v2 |
| Orthologues | Bta-Mir-421-P2 Cfa-Mir-421-P2 Cja-Mir-421-P2 Eca-Mir-421-P2 Hsa-Mir-421-P2 Laf-Mir-421-P2 Mmu-Mir-421-P2 Ocu-Mir-421-P2 Pab-Mir-421-P2 Rno-Mir-421-P2 |
| Node of Origin (locus) | Eutheria |
| Node of Origin (family) | Eutheria |
| Genome context (GCA_003339765.3_Mmul_10_traces) |
CM014356.1: 71307801-71307857 [-] UCSC Ensembl |
| Clustered miRNAs (< 50kb from Mir-421-P2) |
Mir-421-P2
CM014356.1: 71307801-71307857 [-]
UCSC
Ensembl
Mir-374-P2 CM014356.1: 71307966-71308017 [-] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | GCAGUGCCUAAUCCGGUGCACAUUGUAGGCCUCAUUAAAUGUUUGUUGAAUGAAAAAAUGAAUCAUCAACAGACAUUAAUUGGGCGCCUGCUCUGUGAUCUCCAUGGGCUCAGCUUGGet precursor sequence |
| Structure | 10 20 30 40 50 GCAGUGCCUAAUCCGGUG-- UU -| UUA A AAAA CACA GUAGGC CUCA AAUGUUUGUUGA UGA \ GUGU CGUCCG GGGU UUACAGACAACU ACU A GUUCGACUCGGGUACCUCUA CU C^ UAA - AAGU 110 100 90 80 70 60 |
| Deep sequencing | |
| Comment | There is a second Drosha cut -1 on the 3p arm that is monouridylated at the 3' end. |
| 3' NTU | No |
| Motifs | UG at 5p(-14) |
| Star sequence | Mml-Mir-421-P2_5p* |
| mirBase accession | None |
| Sequence |
0- CUCAUUAAAUGUUUGUUGAAUGA -23
Get sequence
|
| Mature sequence | Mml-Mir-421-P2_3p |
| mirBase accession | MIMAT0006319 |
| Sequence |
34- AUCAACAGACAUUAAUUGGGCGC -57
Get sequence
|
| Proposed targets |
TargetScanVert: mml-miR-421 |
