| MirGeneDB ID | Mml-Mir-421-P1-v2 |
|---|---|
| Family name | MIR-421 (all species) |
| Seed | CAGUAAA |
| Species | Rhesus monkey (Macaca mulatta) |
| MiRBase ID | mml-mir-545 |
| Paralogues | Mml-Mir-421-P1-v1 Mml-Mir-421-P2 |
| Orthologues | Bta-Mir-421-P1-v1 Bta-Mir-421-P1-v2 Cfa-Mir-421-P1-v1 Cfa-Mir-421-P1-v2 Cpo-Mir-421-P1 Dno-Mir-421-P1-v1 Dno-Mir-421-P1-v2 Eca-Mir-421-P1-v1 Eca-Mir-421-P1-v2 Hsa-Mir-421-P1-v1 Hsa-Mir-421-P1-v2 Mmr-Mir-421-P1a Mmr-Mir-421-P1b Ocu-Mir-421-P1-v1 Ocu-Mir-421-P1-v2 Pab-Mir-421-P1 |
| Node of Origin (locus) | Eutheria |
| Node of Origin (family) | Eutheria |
| Genome context (GCA_003339765.3_Mmul_10_traces) |
CM014356.1: 71376451-71376510 [-] UCSC Ensembl |
| Clustered miRNAs (< 50kb from Mir-421-P1-v2) |
Mir-421-P1-v1
CM014356.1: 71376450-71376512 [-]
UCSC
Ensembl
Mir-421-P1-v2 CM014356.1: 71376451-71376510 [-] UCSC Ensembl Mir-374-P1 CM014356.1: 71376622-71376673 [-] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | CCAGAGCCCAGCCUGGCACAUUAGUAGGCCUCAGUAAAUGUUUAUUAGAUGAAUAAAUGAAUGACUCAUCAGCAAACAUUUAUUGUGUGCCUGCUAAAGUGAGCUCCACAGGCUCUGGACGet precursor sequence |
| Structure | 10 20 30 40 50 CCAGAGCCCAGCCUGGC--- A CU-| A A AUAAAU AC UUAGUAGGC CAGUAAAUGUUU UU GAUGA \ UG AAUCGUCCG GUUAUUUACAAA GA CUACU G CAGGUCUCGGACACCUCGAG A UGU^ C - CAGUAA . 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | CNNC at 3p(+17) |
| Mature sequence | Mml-Mir-421-P1-v2_5p |
| mirBase accession | None |
| Sequence |
0- UCAGUAAAUGUUUAUUAGAUGA -22
Get sequence
|
| Star sequence | Mml-Mir-421-P1-v2_3p* (predicted) |
| mirBase accession | MIMAT0006409 |
| Sequence |
37- AUCAGCAAACAUUUAUUGUGUGC -60
Get sequence
|
| Proposed targets |
TargetScanVert: mml-miR-545 |
