| MirGeneDB ID | Hsa-Mir-421-P1-v2 |
|---|---|
| Family name | MIR-421 (all species) |
| Seed | CAGUAAA |
| Species | Human (Homo sapiens) |
| MiRBase ID | hsa-mir-545 |
| Paralogues | Hsa-Mir-421-P1-v1 Hsa-Mir-421-P2 |
| Orthologues | Bta-Mir-421-P1-v1 Bta-Mir-421-P1-v2 Cfa-Mir-421-P1-v1 Cfa-Mir-421-P1-v2 Cpo-Mir-421-P1 Dno-Mir-421-P1-v1 Dno-Mir-421-P1-v2 Eca-Mir-421-P1-v1 Eca-Mir-421-P1-v2 Mml-Mir-421-P1-v1 Mml-Mir-421-P1-v2 Mmr-Mir-421-P1a Mmr-Mir-421-P1b Ocu-Mir-421-P1-v1 Ocu-Mir-421-P1-v2 Pab-Mir-421-P1 |
| Node of Origin (locus) | Eutheria |
| Node of Origin (family) | Eutheria |
| Genome context (hg38) |
chrX: 74287126-74287185 [-] UCSC Ensembl |
| Clustered miRNAs (< 50kb from Mir-421-P1-v2) |
Mir-421-P1-v1
chrX: 74287125-74287187 [-]
UCSC
Ensembl
Mir-421-P1-v2 chrX: 74287126-74287185 [-] UCSC Ensembl Mir-374-P1 chrX: 74287295-74287346 [-] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | CCAGAGCCCAGCCUGGCACAUUAGUAGGCCUCAGUAAAUGUUUAUUAGAUGAAUAAAUGAAUGACUCAUCAGCAAACAUUUAUUGUGUGCCUGCUAAAGUGAGCUCCACAGGCUCUGGAUGet precursor sequence |
| Structure | 10 20 30 40 50 CCAGAGCCCAGCCUGGC--- A CU-| A A AUAAAU AC UUAGUAGGC CAGUAAAUGUUU UU GAUGA \ UG AAUCGUCCG GUUAUUUACAAA GA CUACU G UAGGUCUCGGACACCUCGAG A UGU^ C - CAGUAA . 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | No |
| Motifs | CNNC at 3p(+17) |
| Mature sequence | Hsa-Mir-421-P1-v2_5p |
| mirBase accession | MIMAT0004785 |
| Sequence |
0- UCAGUAAAUGUUUAUUAGAUGA -22
Get sequence
|
| Proposed targets |
microrna.org: MIMAT0004785 TargetScanVert: hsa-miR-545-5p TargetMiner: hsa-miR-545-5p miRDB: MIMAT0004785 |
| Star sequence | Hsa-Mir-421-P1-v2_3p* |
| mirBase accession | MIMAT0003165 |
| Sequence |
37- AUCAGCAAACAUUUAUUGUGUGC -60
Get sequence
|
| Proposed targets |
microrna.org: MIMAT0003165 TargetScanVert: hsa-miR-545-3p TargetMiner: hsa-miR-545-3p miRDB: MIMAT0003165 |
