| MirGeneDB ID | Dno-Mir-421-P1-v1 |
|---|---|
| Family name | MIR-421 (all species) |
| Seed | UGAGUAA |
| Species | Nine-banded armadillo (Dasypus novemcinctus) |
| MiRBase ID | dno-mir-545 |
| Paralogues | Dno-Mir-421-P1-v2 |
| Orthologues | Bta-Mir-421-P1-v1 Bta-Mir-421-P1-v2 Cfa-Mir-421-P1-v1 Cfa-Mir-421-P1-v2 Cpo-Mir-421-P1 Eca-Mir-421-P1-v1 Eca-Mir-421-P1-v2 Hsa-Mir-421-P1-v1 Hsa-Mir-421-P1-v2 Mml-Mir-421-P1-v1 Mml-Mir-421-P1-v2 Mmr-Mir-421-P1a Mmr-Mir-421-P1b Ocu-Mir-421-P1-v1 Ocu-Mir-421-P1-v2 Pab-Mir-421-P1 |
| Node of Origin (locus) | Eutheria |
| Node of Origin (family) | Eutheria |
| Genome context (dasNov3) |
JH568995: 131983-132043 [-] UCSC Ensembl |
| Clustered miRNAs (< 50kb from Mir-421-P1-v1) |
Mir-421-P1-v1
JH568995: 131983-132043 [-]
UCSC
Ensembl
Mir-421-P1-v2 JH568995: 131984-132042 [-] UCSC Ensembl Mir-374-P1 JH568995: 132148-132199 [-] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | UCCAGAGCCCAGCCUGGCACAUUAGUAGGCCUGAGUAAAUGUUUAUUGGAUGAAUAAAUGAAUGACUCAUCAACAAACAUUUAUUGUGUGCCUGCUAAAGUGAUCUCCACGGGCUCUGGACGet precursor sequence |
| Structure | 10 20 30 40 50 UCCAGAGCCCAGCCUGG-- A CUG-| AUUG AAUAAAU CAC UUAGUAGGC AGUAAAUGUUU GAUG \ GUG AAUCGUCCG UUAUUUACAAA CUAC G CAGGUCUCGGGCACCUCUA A UGUG^ CAA- UCAGUAA . 110 100 90 80 70 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | CNNC at 3p(+17) |
| Mature sequence | Dno-Mir-421-P1-v1_5p |
| mirBase accession | MIMAT0047973 |
| Sequence |
0- CUGAGUAAAUGUUUAUUGGAUG -22
Get sequence
|
| Star sequence | Dno-Mir-421-P1-v1_3p* (predicted) |
| mirBase accession | MIMAT0047974 |
| Sequence |
39- UCAACAAACAUUUAUUGUGUGC -61
Get sequence
|
