MirGeneDB 3.0

MirGeneDB ID

Mmr-Mir-421-P1b

Family name MIR-421 (all species)
Seed CUCAGUA
Species Gray mouse lemur (Microcebus murinus)
MiRBase ID
Paralogues Mmr-Mir-421-P1a 
Orthologues Bta-Mir-421-P1-v1  Bta-Mir-421-P1-v2  Cfa-Mir-421-P1-v1  Cfa-Mir-421-P1-v2  Cpo-Mir-421-P1  Dno-Mir-421-P1-v1  Dno-Mir-421-P1-v2  Eca-Mir-421-P1-v1  Eca-Mir-421-P1-v2  Hsa-Mir-421-P1-v1  Hsa-Mir-421-P1-v2  Mml-Mir-421-P1-v1  Mml-Mir-421-P1-v2  Ocu-Mir-421-P1-v1  Ocu-Mir-421-P1-v2  Pab-Mir-421-P1 
Node of Origin (locus) M. murinus
Node of Origin (family) Eutheria
Genome context
(GCA_000165445.3_Mmur_3.0_genomic)
CM007685.1: 9645180-9645242 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CUCCAGAGCCCAGCCUGGCACAUUAGUAGGCCUCAGUAAAUGUUUAUUGGAUGAAUAAAUGAAUGACUCAUCAACAAACAUUUAUUGUGUGCCUGCUAAAGUGAUCUCCACGGGCUUUGGACU
Get precursor sequence
Structure
        10          20        30         40        50        60 
CUCCAGAGCCCAGCCUGG--   A         CU-|           AUUG    AAUAAAU 
                    CAC UUAGUAGGC   CAGUAAAUGUUU    GAUG       \
                    GUG AAUCGUCCG   GUUAUUUACAAA    CUAC       G
UCAGGUUUCGGGCACCUCUA   A         UGU^           CAA-    UCAGUAA 
 120       110       100        90        80         70
Deep sequencing
3' NTU Unknown
MotifsNo
Tissue expression
 +
Mu Mu Mu Mu Mu Mu Mu Mu
Mature sequence

Mmr-Mir-421-P1b_5p (predicted)

mirBase accessionNone
Sequence
0- CCUCAGUAAAUGUUUAUUGGAUG -23
Get sequence
Star sequence

Mmr-Mir-421-P1b_3p* (predicted)

mirBase accessionNone
Sequence
39- AUCAACAAACAUUUAUUGUGUGCC -63
Get sequence