MirGeneDB 3.0

MirGeneDB ID

Dno-Mir-421-P1-v2

Family name MIR-421 (all species)
Seed GAGUAAA
Species Nine-banded armadillo (Dasypus novemcinctus)
MiRBase ID dno-mir-545
Paralogues Dno-Mir-421-P1-v1 
Orthologues Bta-Mir-421-P1-v1  Bta-Mir-421-P1-v2  Cfa-Mir-421-P1-v1  Cfa-Mir-421-P1-v2  Cpo-Mir-421-P1  Eca-Mir-421-P1-v1  Eca-Mir-421-P1-v2  Hsa-Mir-421-P1-v1  Hsa-Mir-421-P1-v2  Mml-Mir-421-P1-v1  Mml-Mir-421-P1-v2  Mmr-Mir-421-P1a  Mmr-Mir-421-P1b  Ocu-Mir-421-P1-v1  Ocu-Mir-421-P1-v2  Pab-Mir-421-P1 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(dasNov3)
JH568995: 131984-132042 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-421-P1-v2)
Mir-421-P1-v1 JH568995: 131983-132043 [-] UCSC Ensembl
Mir-421-P1-v2 JH568995: 131984-132042 [-] UCSC Ensembl
Mir-374-P1 JH568995: 132148-132199 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CCAGAGCCCAGCCUGGCACAUUAGUAGGCCUGAGUAAAUGUUUAUUGGAUGAAUAAAUGAAUGACUCAUCAACAAACAUUUAUUGUGUGCCUGCUAAAGUGAUCUCCACGGGCUCUGGA
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Structure
        10          20        30         40        50         
CCAGAGCCCAGCCUGGC--  A         CUG-|          AUUG     AUAAAU 
                   AC UUAGUAGGC    AGUAAAUGUUU    GAUGA      \
                   UG AAUCGUCCG    UUAUUUACAAA    CUACU      G
AGGUCUCGGGCACCUCUAG  A         UGUG^          CAA-     CAGUAA 
       110       100        90        80         70        60
Deep sequencing
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3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
 +
To
Mature sequence

Dno-Mir-421-P1-v2_5p

mirBase accessionMIMAT0047973
Sequence
0- UGAGUAAAUGUUUAUUGGAUGA -22
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Star sequence

Dno-Mir-421-P1-v2_3p* (predicted)

mirBase accessionMIMAT0047974
Sequence
37- AUCAACAAACAUUUAUUGUGUG -59
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