MirGeneDB 3.0
MirGeneDB ID

Cja-Mir-506-P6o2

Family name MIR-506 (all species)
Seed ACUGGUU
Species White-tufted-ear marmoset (Callithrix jacchus)
MiRBase ID
Paralogues Cja-Mir-506-P1a  Cja-Mir-506-P1b  Cja-Mir-506-P1c  Cja-Mir-506-P1d  Cja-Mir-506-P1e  Cja-Mir-506-P2a  Cja-Mir-506-P3  Cja-Mir-506-P4  Cja-Mir-506-P5d1  Cja-Mir-506-P5d2  Cja-Mir-506-P6a  Cja-Mir-506-P6b  Cja-Mir-506-P6c  Cja-Mir-506-P6d  Cja-Mir-506-P6e  Cja-Mir-506-P6o1  Cja-Mir-506-P6o3  Cja-Mir-506-P6o4 
Orthologues Laf-Mir-506 
Node of Origin (locus) C. jacchus
Node of Origin (family) Eutheria
Genome context
(GCA_011100555.2_mCalJa1.2.pat.X_genomic)		 CM021937.1: 138012617-138012673 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UUCUACUAUUAAAGUGAGUGUGCAGUGCCCUACUCAGAAAUGUGCCAGUCAUCUAGAUUAUAUGUCACUGGUUUCUUUCUUGAUAGUGUAAGACUCAGCAAAUAUACGUUUGUGGUG
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Structure
        10         20         30         40        50        
UUCUACUAUUAAAGUGA-  GUGCAG-|  C   C   -    UGU      C  CUAGA 
                  GU       UGC CUA UCA GAAA   GCCAGU AU     \
                  CG       AUG GAU AGU CUUU   UGGUCA UG     U
GUGGUGUUUGCAUAUAAA  ACUCAGA^  U   -   U    CUU      C  UAUAU 
     110       100        90         80        70        60
Deep sequencing
3' NTU Unknown
MotifsNo
Tissue expression
-   +
To
Star sequence

Cja-Mir-506-P6o2_5p* (predicted)
mirBase accessionNone
Sequence 
0- UACUCAGAAAUGUGCCAGUCAU -22
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Mature sequence

Cja-Mir-506-P6o2_3p (predicted)
mirBase accessionNone
Sequence 
35- CACUGGUUUCUUUCUUGAUAGU -57
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