| MirGeneDB ID | Cja-Mir-599 |
|---|---|
| Family name | MIR-599 (all species) |
| Seed | UUGAUAA |
| Species | White-tufted-ear marmoset (Callithrix jacchus) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Ami-Mir-599 Bta-Mir-599 Cfa-Mir-599 Cli-Mir-599 Cpi-Mir-599 Eca-Mir-599 Ete-Mir-599 Hsa-Mir-599 Laf-Mir-599 Lch-Mir-599 Mdo-Mir-599 Mml-Mir-599 Mmr-Mir-599 Mmu-Mir-599 Mun-Mir-599 Neu-Mir-599 Oan-Mir-599 Ocu-Mir-599 Pab-Mir-599 Pbv-Mir-599 Sha-Mir-599 Spt-Mir-599 Tgu-Mir-599 |
| Node of Origin (locus) | Sarcopterygii |
| Node of Origin (family) | Sarcopterygii |
| Genome context (GCA_011100555.2_mCalJa1.2.pat.X_genomic) |
CM021930.1: 95577813-95577871 [+] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | UAAUGCCAAAGAUAUGCUGUCCACAGUGUGUUUGAUAAGCUGACAUGGGACAGGGAUUCUUUUCACUGUUGUGUCAGUUUAUCAAACCCAUACUUGGAUGACAGUCAAUUCAGUUAAAGGet precursor sequence |
| Structure | 10 20 30 40 50 UAAUGCCAAAGAUAUGCU-- C --| GG GGGAUU GUCCA AGUGU GUUUGAUAAGCUGACAU GACA C UAGGU UCAUA CAAACUAUUUGACUGUG UUGU U GAAAUUGACUUAACUGACAG - CC^ -- CACUUU 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | No |
| Mature sequence | Cja-Mir-599_5p |
| mirBase accession | None |
| Sequence |
0- UUUGAUAAGCUGACAUGGGACA -22
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|
| Star sequence | Cja-Mir-599_3p* (predicted) |
| mirBase accession | None |
| Sequence |
38- UUGUGUCAGUUUAUCAAACCC -59
Get sequence
|
