MirGeneDB 3.0
MirGeneDB ID

Ocu-Mir-599

Family name MIR-599 (all species)
Seed UUGAUAA
Species Rabbit (Oryctolagus cuniculus)
MiRBase ID ocu-mir-599
Paralogues
Orthologues Ami-Mir-599  Bta-Mir-599  Cfa-Mir-599  Cja-Mir-599  Cli-Mir-599  Cpi-Mir-599  Eca-Mir-599  Ete-Mir-599  Hsa-Mir-599  Laf-Mir-599  Lch-Mir-599  Mdo-Mir-599  Mml-Mir-599  Mmr-Mir-599  Mmu-Mir-599  Mun-Mir-599  Neu-Mir-599  Oan-Mir-599  Pab-Mir-599  Pbv-Mir-599  Sha-Mir-599  Spt-Mir-599  Tgu-Mir-599 
Node of Origin (locus) Sarcopterygii
Node of Origin (family) Sarcopterygii
Genome context
(oryCun2_add)		 chr3: 115199369-115199427 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-599)		 Mir-599 chr3: 115199369-115199427 [-] UCSC Ensembl
Mir-875 chr3: 115199517-115199573 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CAAUGGUUAAGACAUGCUGUCCAUAGUGUGUUUGAUAAGCCGACAUGGGACAGGGACUCUUUUCACUGUUGUGUCAGUUUAUCAAACCCAUACCUGGACGACAGUCAAUUCAAUUAGAG
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Structure
        10          20         30        40        50         
CAAUGGUUAAGACAUGC--      UA-|  U           C     GG    GGGACU 
                   UGUCCA   GUG GUUUGAUAAGC GACAU  GACA      C
                   GCAGGU   UAC CAAACUAUUUG CUGUG  UUGU      U
GAGAUUAACUUAACUGACA      CCA^  C           A     --    CACUUU 
       110       100        90        80          70        60
Deep sequencing
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3' NTU Unknown
MotifsNo
Tissue expression
-   +
He Ki Te To Wh
Mature sequence

Ocu-Mir-599_5p
mirBase accessionMIMAT0048537
Sequence 
0- UUUGAUAAGCCGACAUGGGACA -22
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Star sequence

Ocu-Mir-599_3p* (predicted)
mirBase accessionMIMAT0048538
Sequence 
38- UUGUGUCAGUUUAUCAAACCC -59
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