MirGeneDB 3.0

MirGeneDB ID

Oan-Mir-599

Family name MIR-599 (all species)
Seed UUGAUAA
Species Platypus (Ornithorhynchus anatinus)
MiRBase ID
Paralogues
Orthologues Ami-Mir-599  Bta-Mir-599  Cfa-Mir-599  Cja-Mir-599  Cli-Mir-599  Cpi-Mir-599  Eca-Mir-599  Ete-Mir-599  Hsa-Mir-599  Laf-Mir-599  Lch-Mir-599  Mdo-Mir-599  Mml-Mir-599  Mmr-Mir-599  Mmu-Mir-599  Mun-Mir-599  Neu-Mir-599  Ocu-Mir-599  Pab-Mir-599  Pbv-Mir-599  Sha-Mir-599  Spt-Mir-599  Tgu-Mir-599 
Node of Origin (locus) Sarcopterygii
Node of Origin (family) Sarcopterygii
Genome context
(mOrnAna1.p.v1_plustraces)
NC_041731.1: 62097434-62097493 [-]
Precursor
(pre-Mir +30nt flank)
CACGGUGAAAAACACACUGUCCUCAGUGCGUUUGAUAAGCUAACAUGAGACAGGAGCUUUUUUUCACGGUUGUGUCAGUGUAUCAGACACAAGCCUGAGCACCAAUUGAUUCCGUUAUAG
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Structure
        10        20            30        40        50          
CACGGUGAAAAACACACU  C     U  ----|       A   A    GA   AGGAGCUU 
                  GU CUCAG GC    GUUUGAUA GCU ACAU  GAC        \
                  CA GAGUC CG    CAGACUAU UGA UGUG  UUG        U
GAUAUUGCCUUAGUUAAC  C     -  AACA^       G   C    --   GCACUUUU 
.       110       100         90        80          70
Deep sequencing
3' NTU Unknown
MotifsNo
Tissue expression
 +
Br Ce He Ki Te
Mature sequence

Oan-Mir-599_5p (predicted)

mirBase accessionNone
Sequence
0- UUUGAUAAGCUAACAUGAGACAG -23
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Star sequence

Oan-Mir-599_3p* (predicted)

mirBase accessionNone
Sequence
38- GUUGUGUCAGUGUAUCAGACAC -60
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