MirGeneDB 3.0

MirGeneDB ID

Neu-Mir-599

Family name MIR-599 (all species)
Seed UUGAUAA
Species Tammar Wallaby (Notamacropus eugenii)
MiRBase ID
Paralogues
Orthologues Ami-Mir-599  Bta-Mir-599  Cfa-Mir-599  Cja-Mir-599  Cli-Mir-599  Cpi-Mir-599  Eca-Mir-599  Ete-Mir-599  Hsa-Mir-599  Laf-Mir-599  Lch-Mir-599  Mdo-Mir-599  Mml-Mir-599  Mmr-Mir-599  Mmu-Mir-599  Mun-Mir-599  Oan-Mir-599  Ocu-Mir-599  Pab-Mir-599  Pbv-Mir-599  Sha-Mir-599  Spt-Mir-599  Tgu-Mir-599 
Node of Origin (locus) Sarcopterygii
Node of Origin (family) Sarcopterygii
Genome context
(GCA_028372415.1_mMacEug1.pri)
CM051816.1: 152262328-152262385 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CAGUGAAAAGGAUAAACUGUCCAGAGUGUGUUUGAUAAGCUGACAUGGGACAGGCUUACUUUUCACUGUUGUGUCAGUUUAUCAAACCCAUACCUGGACACCAGGCAAGACAGUUAAG
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Structure
        10         20          30        40        50         
CAGUGAAAAGGAUAAAC-       A    --|                GG     GCUUA 
                  UGUCCAG GUGU  GUUUGAUAAGCUGACAU  GACAG     C
                  ACAGGUC CAUA  CAAACUAUUUGACUGUG  UUGUC     U
GAAUUGACAGAACGGACC       -    CC^                --     ACUUU 
      110       100         90        80          70        60
Deep sequencing
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3' NTU Unknown
MotifsNo
Tissue expression
 +
Br Ce Fi Li Mi Mi Mi Mi Mi Ov Se Se Te Te Te
Mature sequence

Neu-Mir-599_5p

mirBase accessionNone
Sequence
0- UUUGAUAAGCUGACAUGGGACAG -23
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Star sequence

Neu-Mir-599_3p* (predicted)

mirBase accessionNone
Sequence
37- GUUGUGUCAGUUUAUCAAACC -58
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