MirGeneDB 3.0
MirGeneDB ID

Cja-Mir-615

Family name MIR-615 (all species)
Seed CCGAGCC
Species White-tufted-ear marmoset (Callithrix jacchus)
MiRBase ID
Paralogues
Orthologues Bta-Mir-615  Cfa-Mir-615  Cpo-Mir-615  Eca-Mir-615  Ete-Mir-615  Hsa-Mir-615  Laf-Mir-615  Mml-Mir-615  Mmr-Mir-615  Mmu-Mir-615  Ocu-Mir-615  Pab-Mir-615  Rno-Mir-615 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_011100555.2_mCalJa1.2.pat.X_genomic)		 CM021923.1: 61956664-61956727 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AGGAUUCCAGCGACUCGGGAGGGGCGGGAGGGGGGUCCCCGGUGCUCGGAUCUCGAGGGUGCUUAUUGUUCGGUCCGAGCCUGGGUCUCCCUCUUCCCCCCAACCCCCCCUCAGCCCCUCCGGC
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Structure
        10        20           30        40        50        60  
AGGAUUCCAGCGACUCGGGA---|   C          UC     U         UCGAGGGUG 
                       GGGG GGGAGGGGGG  CCCGG GCUCGGAUC         \
                       CCCC CCUUCUCCCU  GGGUC CGAGCCUGG         C
CGGCCUCCCCGACUCCCCCCCAA^   -          CU     -         CUUGUUAUU 
  120       110       100         90         80        70
Deep sequencing
3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
-   +
To
Star sequence

Cja-Mir-615_5p* (predicted)
mirBase accessionNone
Sequence 
0- GGGGGUCCCCGGUGCUCGGAUC -22
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Mature sequence

Cja-Mir-615_3p (predicted)
mirBase accessionNone
Sequence 
43- UCCGAGCCUGGGUCUCCCUCU -64
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