MirGeneDB 3.0
MirGeneDB ID

Cfa-Mir-615

Family name MIR-615 (all species)
Seed CCGAGCC
Species Dog (Canis familiaris)
MiRBase ID cfa-mir-615
Paralogues
Orthologues Bta-Mir-615  Cja-Mir-615  Cpo-Mir-615  Eca-Mir-615  Ete-Mir-615  Hsa-Mir-615  Laf-Mir-615  Mml-Mir-615  Mmr-Mir-615  Mmu-Mir-615  Ocu-Mir-615  Pab-Mir-615  Rno-Mir-615 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(canFam3_add)		 chr27: 1230453-1230515 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-615)		 Mir-615 chr27: 1230453-1230515 [-] UCSC Ensembl
Mir-196-P4 chr27: 1270718-1270776 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AGGCUUCCAGCGACUCGGGAGGGGCGGGAGGGGGGUCCCCGGAGCUCGGUCUCGAGGGUGCUUAUUGUUCGGUCCGAGCCCGGGUCUCCCUCUCCCCCCAGCCCUCAGCCCCUACGGCUGCAG
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Structure
        10           20        30        40        50        60 
AGGCUUCCAGCGACUCG---| AG   C          UC     A      U  CGAGGGUG 
                    GG  GGG GGGAGGGGGG  CCCGG GCUCGG CU        C
                    CC  CCC CCCUCUCCCU  GGGCC CGAGCC GG        U
GACGUCGGCAUCCCCGACUC^ GA   -          CU     -      U  CUUGUUAU 
 120       110       100         90        80         70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
An An An Bl Ce Co He Hi Hi Hy Ki Ki Li Lu Ov Sk Te Te
Star sequence

Cfa-Mir-615_5p*
mirBase accessionMIMAT0009920
Sequence 
0- GGGGGUCCCCGGAGCUCGGUCU -22
Get sequence
Proposed targets TargetScanVert: cfa-miR-615
miRDB: MIMAT0009920
Mature sequence

Cfa-Mir-615_3p
mirBase accessionNone
Sequence 
42- UCCGAGCCCGGGUCUCCCUCU -63
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