MirGeneDB 2.1

MirGeneDB ID

Ete-Mir-615

Family name MIR-615 (all species)
Seed CCGAGCC
Species Lesser hedgehog tenrec (Echinops telfairi)
MiRBase ID
Paralogues
Orthologues Bta-Mir-615  Cfa-Mir-615  Cpo-Mir-615  Hsa-Mir-615  Mml-Mir-615  Mmu-Mir-615  Ocu-Mir-615  Rno-Mir-615 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(echTel2)
JH980427: 799628-799694 [+] UCSC
Precursor
(pre-Mir +30nt flank)
GAUUCCCGUCCAACUCGGGAGGGGCGGGACGGGGGUCCCGGGGGCUGGGGUCGGGGAAGGUGCUCUCAUUGUUCCGCCCGAGCCCGGGGCUCUCUCUCCCUAUCCAGCCCGCAGGCCCGCCGGCGGC
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Structure
        10             20        30        40        50        60   
GAUUCCCGUCCAACUCG-----|  G   C    C         GG     G    CGGGGAAGGUG 
                      GGA GGG GGGA GGGGGUCCC  GGGCU GGGU           C
                      CCU UCC CUCU CUCUCGGGG  CCCGA CCCG           U
CGGCGGCCGCCCGGACGCCCGA^  A   -    -         --     G    CCUUGUUACUC 
     120       110       100          90          80        70
Deep sequencing
3' NTU Unknown
MotifsNo
Tissue expression
 +
To
Star sequence

Ete-Mir-615_5p* (predicted)

mirBase accessionNone
Sequence
0- GGGGGUCCCGGGGGCUGGGGUC -22
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Mature sequence

Ete-Mir-615_3p (predicted)

mirBase accessionNone
Sequence
46- CCCGAGCCCGGGGCUCUCUCU -67
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