| MirGeneDB ID | Laf-Mir-615 |
|---|---|
| Family name | MIR-615 (all species) |
| Seed | CCGAGCC |
| Species | African bush elephant (Loxodonta africana) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Bta-Mir-615 Cfa-Mir-615 Cja-Mir-615 Cpo-Mir-615 Eca-Mir-615 Ete-Mir-615 Hsa-Mir-615 Mml-Mir-615 Mmr-Mir-615 Mmu-Mir-615 Ocu-Mir-615 Pab-Mir-615 Rno-Mir-615 |
| Node of Origin (locus) | Eutheria |
| Node of Origin (family) | Eutheria |
| Genome context (GCA_000001905.1_Loxafr3.0) |
GL010029.1: 40466825-40466888 [+] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | AGGAUUCCUGCGAUUCGGGAGGGGCGGGAGGGGGGUCCCCGGUGCUCGGAUCUCGAGGGUGCUUAUUGUUCGGUCCGAGCCUGGGUCUCCCUCUCCCCCCACCCCUUCAGCCCCUCCGGCUGCUGet precursor sequence |
| Structure | 10 20 30 40 50 60 AGGAUUCCUGCGAUUCG---| AG C UC U UCGAGGGUG GG GGG GGGAGGGGGG CCCGG GCUCGGAUC \ CC CCC CCCUCUCCCU GGGUC CGAGCCUGG C UCGUCGGCCUCCCCGACUUC^ CA - CU - CUUGUUAUU 120 110 100 90 80 70 |
| Deep sequencing | |
| 3' NTU | No |
| Motifs | CNNC at 3p(+17) |
| Star sequence | Laf-Mir-615_5p* (predicted) |
| mirBase accession | None |
| Sequence |
0- GGGGGUCCCCGGUGCUCGGAUC -22
Get sequence
|
| Mature sequence | Laf-Mir-615_3p |
| mirBase accession | None |
| Sequence |
43- UCCGAGCCUGGGUCUCCCUCU -64
Get sequence
|
