| MirGeneDB ID | Pab-Mir-615 |
|---|
| Family name |
MIR-615 (all species) |
|---|
| Seed |
CCGAGCC |
|---|
| Species |
Sumatran orangutan (Pongo abelii) |
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| MiRBase ID |
|
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| Paralogues |
|
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| Orthologues |
Bta-Mir-615
Cfa-Mir-615
Cja-Mir-615
Cpo-Mir-615
Eca-Mir-615
Ete-Mir-615
Hsa-Mir-615
Laf-Mir-615
Mml-Mir-615
Mmr-Mir-615
Mmu-Mir-615
Ocu-Mir-615
Rno-Mir-615
|
|---|
| Node of Origin (locus) |
Eutheria
|
|---|
| Node of Origin (family) |
Eutheria
|
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Genome context
(GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces) |
CM054689.2: 51832659-51832722 [+]
UCSC
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
AGGAUUCCAGCGACUCGGGAGGGGCGGGAGGGGGUUCCCCGGUGCUCGGAUCUCGAGGGUGCUUAUUGUUCGGUCCGAGCCUGGGUCUCCGUCUUCCCCCCAACCCCCCCGCUCAGCCCCUCCG
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
AGGAUUCCAGCGACUCGGGA---| C G UUC U UCGAGGGUG
GGGG GGGAGG GG CCCGG GCUCGGAUC \
CCCC CCUUCU CC GGGUC CGAGCCUGG C
GCCUCCCCGACUCGCCCCCCCAA^ - G UCU - CUUGUUAUU
120 110 100 90 80 70 |
|---|
| Deep sequencing |
|
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| 3' NTU |
Unknown
|
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| Motifs | No |
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Tissue expression
|
|
|---|
| Star sequence |
Pab-Mir-615_5p* (predicted) |
| mirBase accession | None |
|---|
| Sequence |
0- GGGGUUCCCCGGUGCUCGGAUC -22
Get sequence
|
|---|
| Mature sequence |
Pab-Mir-615_3p (predicted) |
| mirBase accession | None |
|---|
| Sequence |
43- UCCGAGCCUGGGUCUCCGUCU -64
Get sequence
|
|---|
