MirGeneDB 3.0

MirGeneDB ID

Mmr-Mir-615

Family name MIR-615 (all species)
Seed CCGAGCC
Species Gray mouse lemur (Microcebus murinus)
MiRBase ID mmr-mir-615
Paralogues
Orthologues Bta-Mir-615  Cfa-Mir-615  Cja-Mir-615  Cpo-Mir-615  Eca-Mir-615  Ete-Mir-615  Hsa-Mir-615  Laf-Mir-615  Mml-Mir-615  Mmu-Mir-615  Ocu-Mir-615  Pab-Mir-615  Rno-Mir-615 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_000165445.3_Mmur_3.0_genomic)
CM007667.1: 56934475-56934538 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AGGAUUCCAGCGACUCGGGAGGGGCGGGAGGGGGGUCCCCGGUGCUCGGAUCUCGAGGGUGCUUAUUGUUCGGUCCGAGCCUGGGUCUCCCUCUUCCCCCCACCCCACCUCAGCCCCUCCGGCU
Get precursor sequence
Structure
        10           20        30        40        50        60  
AGGAUUCCAGCGACUCG---| A    C          UC     U         UCGAGGGUG 
                    GG GGGG GGGAGGGGGG  CCCGG GCUCGGAUC         \
                    CC CCCC CCUUCUCCCU  GGGUC CGAGCCUGG         C
UCGGCCUCCCCGACUCCACC^ A    -          CU     -         CUUGUUAUU 
  120       110       100         90         80        70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
Mu Mu Mu Mu Mu Mu Mu Mu
Star sequence

Mmr-Mir-615_5p*

mirBase accessionNone
Sequence
0- GGGGGUCCCCGGUGCUCGGAUC -22
Get sequence
Mature sequence

Mmr-Mir-615_3p

mirBase accessionMIMAT0049125
Sequence
43- UCCGAGCCUGGGUCUCCCUCU -64
Get sequence