MirGeneDB 2.1

MirGeneDB ID

Hsa-Mir-615

Family name MIR-615 (all species)
Seed CCGAGCC
Species Human (Homo sapiens)
MiRBase ID hsa-mir-615
Paralogues
Orthologues Bta-Mir-615  Cfa-Mir-615  Cpo-Mir-615  Ete-Mir-615  Mml-Mir-615  Mmu-Mir-615  Ocu-Mir-615  Rno-Mir-615 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(hg38)
chr12: 54033967-54034030 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-615)
Mir-196-P4 chr12: 53991762-53991820 [+] UCSC Ensembl
Mir-615 chr12: 54033967-54034030 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AGGAUUCCAGCGACUCGGGAGGGGCGGGAGGGGGGUCCCCGGUGCUCGGAUCUCGAGGGUGCUUAUUGUUCGGUCCGAGCCUGGGUCUCCCUCUUCCCCCCAACCCCCCCUCAGCCCCUCCGGC
Get precursor sequence
Structure
        10        20           30        40        50        60  
AGGAUUCCAGCGACUCGGGA---|   C          UC     U         UCGAGGGUG 
                       GGGG GGGAGGGGGG  CCCGG GCUCGGAUC         \
                       CCCC CCUUCUCCCU  GGGUC CGAGCCUGG         C
CGGCCUCCCCGACUCCCCCCCAA^   -          CU     -         CUUGUUAUU 
  120       110       100         90         80        70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
1- 1- 1- 1- 1- 1- 1- 1- 1- 1- 1- 1- 1- 2- 2- 2- 2- 2- 2- 2- 2- 2- 2- 2- 3- 3- 3- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 5- 5- 5- 5- 5- 5- 5- 6- 6- 6- 6- 6-
Star sequence

Hsa-Mir-615_5p*

mirBase accessionMIMAT0004804
Sequence
0- GGGGGUCCCCGGUGCUCGGAUC -22
Get sequence
Proposed targets microrna.org: MIMAT0004804
TargetScanVert: hsa-miR-615-5p
TargetMiner: hsa-miR-615-5p
miRDB: MIMAT0004804
Mature sequence

Hsa-Mir-615_3p

mirBase accessionMIMAT0003283
Sequence
43- UCCGAGCCUGGGUCUCCCUCU -64
Get sequence
Proposed targets microrna.org: MIMAT0003283
TargetScanVert: hsa-miR-615-3p
TargetMiner: hsa-miR-615-3p
miRDB: MIMAT0003283