MirGeneDB 2.1
MirGeneDB ID

Cmi-Mir-455

Family name MIR-455 (all species)
Seed AUGUGCC
Species Australian ghostshark (Callorhinchus milii)
MiRBase ID
Paralogues
Orthologues Aca-Mir-455  Ami-Mir-455  Bta-Mir-455  Cfa-Mir-455  Cli-Mir-455  Cpi-Mir-455  Cpo-Mir-455  Dno-Mir-455  Dre-Mir-455-P1  Dre-Mir-455-P2  Ebu-Mir-455-v1  Ebu-Mir-455-v2  Ete-Mir-455  Gga-Mir-455  Gja-Mir-455  Gmo-Mir-455-P1  Gmo-Mir-455-P2  Hsa-Mir-455  Lch-Mir-455  Loc-Mir-455  Mal-Mir-455-P1  Mal-Mir-455-P2  Mdo-Mir-455  Mml-Mir-455  Mmu-Mir-455  Mun-Mir-455  Oan-Mir-455  Ocu-Mir-455  Pbv-Mir-455  Pma-Mir-455  Rno-Mir-455  Sha-Mir-455  Spt-Mir-455  Sto-Mir-455  Tgu-Mir-455  Tni-Mir-455-P1  Tni-Mir-455-P2  Xla-Mir-455-P3  Xla-Mir-455-P4  Xtr-Mir-455 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(GCA_000165045.2_Callorhinchus_milii-6.1.3)		 KI635931.1: 2028087-2028144 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GCAGAGGCAACUCGAUCCCUGGUGUGAGGGUAUGUGCCCUUGGACUACAUCGUGGAAGCCAGCACCAUGCAGUCCAUGGGCAUAUACACUUGCCUCAAGGCUUUGUUCAUCACCUGCA
Get precursor sequence
Structure
        10          20        30        40        50        
GCAGAGGCAACUCGAUC-  -|  U UG  G          U      A   C UGGAA 
                  CC UGG G  AG GUAUGUGCCC UGGACU CAU G     G
                  GG ACU C  UC CAUAUACGGG ACCUGA GUA C     C
ACGUCCACUACUUGUUUC  A^  C GU  A          U      C   C ACGAC 
      110       100        90        80        70        60
Deep sequencing
Go to detailed chart
CommentThere are mutliple Dicer cuts on the 3p arm.
3' NTU No
MotifsNo
Tissue expression
-   +
Bl Br Ey Gi Gl He In Ki Li Mu Ov Pa Sk Sp Te Ut
Mature sequence

Cmi-Mir-455_5p
mirBase accessionNone
Sequence 
0- UAUGUGCCCUUGGACUACAUCG -22
Get sequence
Star sequence

Cmi-Mir-455_3p*
mirBase accessionNone
Sequence 
36- AUGCAGUCCAUGGGCAUAUACA -58
Get sequence