MirGeneDB 2.1
MirGeneDB ID

Cpo-Mir-505-v2

Family name MIR-505 (all species)
Seed UCAACAC
Species Guinea pig (Cavia porcellus)
MiRBase ID cpo-mir-505
Paralogues Cpo-Mir-505-v1 
Orthologues Bta-Mir-505-v2  Cfa-Mir-505-v2  Dno-Mir-505-v2  Ete-Mir-505-v2  Hsa-Mir-505-v2  Mml-Mir-505-v2  Mmu-Mir-505-v2  Ocu-Mir-505-v2  Rno-Mir-505-v2 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(cavPor3)		 scaffold_79: 2306789-2306847 [+] UCSC
Clustered miRNAs
(< 50kb from Mir-505-v2)		 Mir-505-v1 scaffold_79: 2306789-2306847 [+] UCSC
Mir-505-v2 scaffold_79: 2306789-2306847 [+] UCSC
Precursor
(pre-Mir +30nt flank)
CCUGCGGUGGUAAAUUGAUGCACUCAGUGGGGGAGCCAGGAAGUAUUGAUGUUUCUGCCAGUUUAGCGUCAACACUUGCUGGUUUCCUCUCUGGAGCAUCACCAAGUUCGUGGAUUUUC
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Structure
        10           20        30        40        50         
CCUGCGGUGGUAAAUUG---|   A U   U           G    A       UUCUGC 
                    AUGC C CAG GGGGGAGCCAG AAGU UUGAUGU      \
                    UACG G GUC CUCCUUUGGUC UUCA AACUGCG      C
CUUUUAGGUGCUUGAACCAC^   A -   U           G    C       AUUUGA 
       110       100         90        80        70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
To
Star sequence

Cpo-Mir-505-v2_5p* (predicted)
mirBase accessionMIMAT0047311
Sequence 
0- GGGAGCCAGGAAGUAUUGAUGU -22
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Mature sequence

Cpo-Mir-505-v2_3p
mirBase accessionMIMAT0047312
Sequence 
37- GUCAACACUUGCUGGUUUCCUC -59
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