MirGeneDB 3.0
MirGeneDB ID

Cfa-Mir-505-v2

Family name MIR-505 (all species)
Seed UCAACAC
Species Dog (Canis familiaris)
MiRBase ID cfa-mir-505
Paralogues Cfa-Mir-505-v1 
Orthologues Bta-Mir-505-v2  Cja-Mir-505  Cpo-Mir-505-v2  Dno-Mir-505-v2  Eca-Mir-505-v2  Ete-Mir-505-v2  Hsa-Mir-505-v2  Laf-Mir-505-v2  Mml-Mir-505-v2  Mmr-Mir-505-v2  Mmu-Mir-505-v2  Ocu-Mir-505-v2  Pab-Mir-505-v2  Rno-Mir-505-v2 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(canFam3_add)		 chrX: 109866459-109866517 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-505-v2)		 Mir-505-v1 chrX: 109866459-109866517 [-] UCSC Ensembl
Mir-505-v2 chrX: 109866459-109866517 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CUGCCGCUGGUAAAUUGAUGCGCUCAGUGGGGGAGCCAGGAAGUAUUGAUGUUUCUGCCAGUUUAGCGUCAACACUUGCUGGUUUCCUCUCUGGAGCAUCACCAAGUUCGUGGAUUUUC
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Structure
        10           20        30        40        50         
CUGCCGCUGGUAAAUUG---|   GC    U           G    A       UUCUGC 
                    AUGC  UCAG GGGGGAGCCAG AAGU UUGAUGU      \
                    UACG  GGUC CUCCUUUGGUC UUCA AACUGCG      C
CUUUUAGGUGCUUGAACCAC^   A-    U           G    C       AUUUGA 
       110       100         90        80        70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
An An An Bl Ce Co He Hi Hi Hy Ki Ki Li Lu Ov Sk Te Te
Star sequence

Cfa-Mir-505-v2_5p*
mirBase accessionMIMAT0009908
Sequence 
0- GGGAGCCAGGAAGUAUUGAUGU -22
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Proposed targets TargetScanVert: cfa-miR-505
miRDB: MIMAT0009908
Mature sequence

Cfa-Mir-505-v2_3p
mirBase accessionNone
Sequence 
37- GUCAACACUUGCUGGUUUCCUC -59
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