MirGeneDB 3.0
MirGeneDB ID

Pab-Mir-505-v2

Family name MIR-505 (all species)
Seed GGAGCCA
Species Sumatran orangutan (Pongo abelii)
MiRBase ID
Paralogues Pab-Mir-505-v1 
Orthologues Bta-Mir-505-v2  Cfa-Mir-505-v2  Cja-Mir-505  Cpo-Mir-505-v2  Dno-Mir-505-v2  Eca-Mir-505-v2  Ete-Mir-505-v2  Hsa-Mir-505-v2  Laf-Mir-505-v2  Mml-Mir-505-v2  Mmr-Mir-505-v2  Mmu-Mir-505-v2  Ocu-Mir-505-v2  Rno-Mir-505-v2 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces)		 CM054702.2: 146132079-146132137 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CUGCCGGUGGUAAAUUGAUGCACCCAGUGGGGGAGCCAGGAAGUAUUGAUGUUUCUGCCAGUUUAGCGUCAACACUUGCUGGUUUCCUCUCUGGAGCAUUGCCAAGUUCGUGGAUUUUC
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Structure
        10           20        30        40        50         
CUGCCGGUGGUAAAUUG---|   AC    U           G    A       UUCUGC 
                    AUGC  CCAG GGGGGAGCCAG AAGU UUGAUGU      \
                    UACG  GGUC CUCCUUUGGUC UUCA AACUGCG      C
CUUUUAGGUGCUUGAACCGU^   A-    U           G    C       AUUUGA 
       110       100         90        80        70        60
Deep sequencing
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3' NTU Unknown
MotifsNo
Tissue expression
-   +
Br Br Li Li
Mature sequence

Pab-Mir-505-v2_5p
mirBase accessionNone
Sequence 
0- GGGAGCCAGGAAGUAUUGAUGU -22
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Co-mature sequence

Pab-Mir-505-v2_3p (predicted)
mirBase accessionNone
Sequence 
37- GUCAACACUUGCUGGUUUCCUC -59
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