MirGeneDB 3.0
MirGeneDB ID

Pab-Mir-505-v1

Family name MIR-505 (all species)
Seed GGAGCCA
Species Sumatran orangutan (Pongo abelii)
MiRBase ID
Paralogues Pab-Mir-505-v2 
Orthologues Bta-Mir-505-v1  Cfa-Mir-505-v1  Cja-Mir-505  Cpo-Mir-505-v1  Dno-Mir-505-v1  Eca-Mir-505-v1  Ete-Mir-505-v1  Hsa-Mir-505-v1  Laf-Mir-505-v1  Mml-Mir-505-v1  Mmr-Mir-505-v1  Mmu-Mir-505-v1  Ocu-Mir-505-v1  Rno-Mir-505-v1 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces)		 CM054702.2: 146132079-146132137 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CUGCCGGUGGUAAAUUGAUGCACCCAGUGGGGGAGCCAGGAAGUAUUGAUGUUUCUGCCAGUUUAGCGUCAACACUUGCUGGUUUCCUCUCUGGAGCAUUGCCAAGUUCGUGGAUUUUC
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Structure
        10           20        30        40        50         
CUGCCGGUGGUAAAUUG---|   AC    U           G    A        UCUGC 
                    AUGC  CCAG GGGGGAGCCAG AAGU UUGAUGUU     \
                    UACG  GGUC CUCCUUUGGUC UUCA AACUGCGA     C
CUUUUAGGUGCUUGAACCGU^   A-    U           G    C        UUUGA 
       110       100         90        80        70        60
Deep sequencing
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3' NTU Unknown
MotifsNo
Tissue expression
-   +
Br Br Li Li
Mature sequence

Pab-Mir-505-v1_5p
mirBase accessionNone
Sequence 
0- GGGAGCCAGGAAGUAUUGAUGUU -23
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Star sequence

Pab-Mir-505-v1_3p* (predicted)
mirBase accessionNone
Sequence 
36- CGUCAACACUUGCUGGUUUCCUC -59
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