| MirGeneDB ID | Pab-Mir-505-v1 |
|---|---|
| Family name | MIR-505 (all species) |
| Seed | GGAGCCA |
| Species | Sumatran orangutan (Pongo abelii) |
| MiRBase ID | |
| Paralogues | Pab-Mir-505-v2 |
| Orthologues | Bta-Mir-505-v1 Cfa-Mir-505-v1 Cja-Mir-505 Cpo-Mir-505-v1 Dno-Mir-505-v1 Eca-Mir-505-v1 Ete-Mir-505-v1 Hsa-Mir-505-v1 Laf-Mir-505-v1 Mml-Mir-505-v1 Mmr-Mir-505-v1 Mmu-Mir-505-v1 Ocu-Mir-505-v1 Rno-Mir-505-v1 |
| Node of Origin (locus) | Eutheria |
| Node of Origin (family) | Eutheria |
| Genome context (GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces) |
CM054702.2: 146132079-146132137 [-] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | CUGCCGGUGGUAAAUUGAUGCACCCAGUGGGGGAGCCAGGAAGUAUUGAUGUUUCUGCCAGUUUAGCGUCAACACUUGCUGGUUUCCUCUCUGGAGCAUUGCCAAGUUCGUGGAUUUUCGet precursor sequence |
| Structure | 10 20 30 40 50 CUGCCGGUGGUAAAUUG---| AC U G A UCUGC AUGC CCAG GGGGGAGCCAG AAGU UUGAUGUU \ UACG GGUC CUCCUUUGGUC UUCA AACUGCGA C CUUUUAGGUGCUUGAACCGU^ A- U G C UUUGA 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | No |
| Mature sequence | Pab-Mir-505-v1_5p |
| mirBase accession | None |
| Sequence |
0- GGGAGCCAGGAAGUAUUGAUGUU -23
Get sequence
|
| Star sequence | Pab-Mir-505-v1_3p* (predicted) |
| mirBase accession | None |
| Sequence |
36- CGUCAACACUUGCUGGUUUCCUC -59
Get sequence
|
