MirGeneDB 2.1

MirGeneDB ID

Mml-Mir-505-v1

Family name MIR-505 (all species)
Seed GUCAACA
Species Rhesus monkey (Macaca mulatta)
MiRBase ID mml-mir-505
Paralogues Mml-Mir-505-v2 
Orthologues Bta-Mir-505-v1  Cfa-Mir-505-v1  Cpo-Mir-505-v1  Dno-Mir-505-v1  Ete-Mir-505-v1  Hsa-Mir-505-v1  Mmu-Mir-505-v1  Ocu-Mir-505-v1  Rno-Mir-505-v1 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(rheMac8_trace)
chrX: 133863137-133863195 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-505-v1)
Mir-505-v1 chrX: 133863137-133863195 [-] UCSC Ensembl
Mir-505-v2 chrX: 133863137-133863195 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CUGCCGGUGGUAAAUUGAUGCACCCAGUGGGGGAGCCAGGAAGUAUUGAUGUUUCUGCCAGUUUAGCGUCAACACUUGCUGGUUUCCUCUCUGGAGCAUCACCAAGUUCGUGGAUUUUC
Get precursor sequence
Structure
        10           20        30        40        50         
CUGCCGGUGGUAAAUUG---|   AC    U           G    A        UCUGC 
                    AUGC  CCAG GGGGGAGCCAG AAGU UUGAUGUU     \
                    UACG  GGUC CUCCUUUGGUC UUCA AACUGCGA     C
CUUUUAGGUGCUUGAACCAC^   A-    U           G    C        UUUGA 
       110       100         90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsNo
Tissue expression
 +
Bo Br Br Br He Ki Li Lu Ly Sk Sp Te Th
Star sequence

Mml-Mir-505-v1_5p*

mirBase accessionMIMAT0026892
Sequence
0- GGGAGCCAGGAAGUAUUGAUGUU -23
Get sequence
Proposed targets TargetScanVert: mml-miR-505-5p
Mature sequence

Mml-Mir-505-v1_3p

mirBase accessionMIMAT0006369
Sequence
36- CGUCAACACUUGCUGGUUUCCUC -59
Get sequence
Proposed targets TargetScanVert: mml-miR-505-3p