MirGeneDB 3.0
MirGeneDB ID

Ocu-Mir-505-v1

Family name MIR-505 (all species)
Seed GUCAACA
Species Rabbit (Oryctolagus cuniculus)
MiRBase ID ocu-mir-505
Paralogues Ocu-Mir-505-v2 
Orthologues Bta-Mir-505-v1  Cfa-Mir-505-v1  Cja-Mir-505  Cpo-Mir-505-v1  Dno-Mir-505-v1  Eca-Mir-505-v1  Ete-Mir-505-v1  Hsa-Mir-505-v1  Laf-Mir-505-v1  Mml-Mir-505-v1  Mmr-Mir-505-v1  Mmu-Mir-505-v1  Pab-Mir-505-v1  Rno-Mir-505-v1 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(oryCun2_add)		 chrUn0002: 3182537-3182595 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-505-v1)		 Mir-505-v1 chrUn0002: 3182537-3182595 [-] UCSC Ensembl
Mir-505-v2 chrUn0002: 3182537-3182595 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CUGCCGGUGGUAAAUUGAUGCACCCAGUGGGGGAGCCAGGAAGUAUUGAUGUUUCUGCCAGUUUAGCGUCAACACUUGCUGGUUUCCUCUUUGGAGCAUCACCAAAUUCGUGGAUUAUC
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Structure
        10           20        30        40        50         
CUGCCGGUGGUAAAUUG---|   AC    U           G    A        UCUGC 
                    AUGC  CCAG GGGGGAGCCAG AAGU UUGAUGUU     \
                    UACG  GGUU CUCCUUUGGUC UUCA AACUGCGA     C
CUAUUAGGUGCUUAAACCAC^   A-    U           G    C        UUUGA 
       110       100         90        80        70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
He Ki Te To Wh
Star sequence

Ocu-Mir-505-v1_5p*
mirBase accessionMIMAT0048503
Sequence 
0- GGGAGCCAGGAAGUAUUGAUGUU -23
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Mature sequence

Ocu-Mir-505-v1_3p
mirBase accessionMIMAT0048504
Sequence 
36- CGUCAACACUUGCUGGUUUCCUC -59
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