MirGeneDB 3.0
MirGeneDB ID

Laf-Mir-505-v1

Family name MIR-505 (all species)
Seed GGAGCCA
Species African bush elephant (Loxodonta africana)
MiRBase ID
Paralogues Laf-Mir-505-v2 
Orthologues Bta-Mir-505-v1  Cfa-Mir-505-v1  Cja-Mir-505  Cpo-Mir-505-v1  Dno-Mir-505-v1  Eca-Mir-505-v1  Ete-Mir-505-v1  Hsa-Mir-505-v1  Mml-Mir-505-v1  Mmr-Mir-505-v1  Mmu-Mir-505-v1  Ocu-Mir-505-v1  Pab-Mir-505-v1  Rno-Mir-505-v1 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_000001905.1_Loxafr3.0)		 GL010116.1: 1375953-1376011 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CCUGCCGGUAGUAAAUGAUGCGCCCAGUGGGGGAGCCAGGAAGUAUUGAUGUUUCUGCCAGUUUAGCGUCAACACUUGCUGGUUUCCUCUCUGGAGCAUCACCAAGUUCGUGGAUUUUC
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Structure
        10           20        30        40        50         
CCUGCCGGUAGUAAAUG---|   GC    U           G    A       UUCUGC 
                    AUGC  CCAG GGGGGAGCCAG AAGU UUGAUGU      \
                    UACG  GGUC CUCCUUUGGUC UUCA AACUGCG      C
CUUUUAGGUGCUUGAACCAC^   A-    U           G    C       AUUUGA 
       110       100         90        80        70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
Wh
Mature sequence

Laf-Mir-505-v1_5p
mirBase accessionNone
Sequence 
0- GGGAGCCAGGAAGUAUUGAUGU -22
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Star sequence

Laf-Mir-505-v1_3p*
mirBase accessionNone
Sequence 
37- GUCAACACUUGCUGGUUUCCUC -59
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