| MirGeneDB ID | Laf-Mir-505-v1 |
|---|---|
| Family name | MIR-505 (all species) |
| Seed | GGAGCCA |
| Species | African bush elephant (Loxodonta africana) |
| MiRBase ID | |
| Paralogues | Laf-Mir-505-v2 |
| Orthologues | Bta-Mir-505-v1 Cfa-Mir-505-v1 Cja-Mir-505 Cpo-Mir-505-v1 Dno-Mir-505-v1 Eca-Mir-505-v1 Ete-Mir-505-v1 Hsa-Mir-505-v1 Mml-Mir-505-v1 Mmr-Mir-505-v1 Mmu-Mir-505-v1 Ocu-Mir-505-v1 Pab-Mir-505-v1 Rno-Mir-505-v1 |
| Node of Origin (locus) | Eutheria |
| Node of Origin (family) | Eutheria |
| Genome context (GCA_000001905.1_Loxafr3.0) |
GL010116.1: 1375953-1376011 [+] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | CCUGCCGGUAGUAAAUGAUGCGCCCAGUGGGGGAGCCAGGAAGUAUUGAUGUUUCUGCCAGUUUAGCGUCAACACUUGCUGGUUUCCUCUCUGGAGCAUCACCAAGUUCGUGGAUUUUCGet precursor sequence |
| Structure | 10 20 30 40 50 CCUGCCGGUAGUAAAUG---| GC U G A UUCUGC AUGC CCAG GGGGGAGCCAG AAGU UUGAUGU \ UACG GGUC CUCCUUUGGUC UUCA AACUGCG C CUUUUAGGUGCUUGAACCAC^ A- U G C AUUUGA 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | No |
| Motifs | No |
| Mature sequence | Laf-Mir-505-v1_5p |
| mirBase accession | None |
| Sequence |
0- GGGAGCCAGGAAGUAUUGAUGU -22
Get sequence
|
| Star sequence | Laf-Mir-505-v1_3p* |
| mirBase accession | None |
| Sequence |
37- GUCAACACUUGCUGGUUUCCUC -59
Get sequence
|
