MirGeneDB 3.0
MirGeneDB ID

Laf-Mir-505-v2

Family name MIR-505 (all species)
Seed GAGCCAG
Species African bush elephant (Loxodonta africana)
MiRBase ID
Paralogues Laf-Mir-505-v1 
Orthologues Bta-Mir-505-v2  Cfa-Mir-505-v2  Cja-Mir-505  Cpo-Mir-505-v2  Dno-Mir-505-v2  Eca-Mir-505-v2  Ete-Mir-505-v2  Hsa-Mir-505-v2  Mml-Mir-505-v2  Mmr-Mir-505-v2  Mmu-Mir-505-v2  Ocu-Mir-505-v2  Pab-Mir-505-v2  Rno-Mir-505-v2 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_000001905.1_Loxafr3.0)		 GL010116.1: 1375954-1376010 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CUGCCGGUAGUAAAUGAUGCGCCCAGUGGGGGAGCCAGGAAGUAUUGAUGUUUCUGCCAGUUUAGCGUCAACACUUGCUGGUUUCCUCUCUGGAGCAUCACCAAGUUCGUGGAUUUU
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Structure
        10           20        30        40        50        
CUGCCGGUAGUAAAUGA---|  GC    U           G    A        UCUGC 
                    UGC  CCAG GGGGGAGCCAG AAGU UUGAUGUU     \
                    ACG  GGUC CUCCUUUGGUC UUCA AACUGCGA     C
UUUUAGGUGCUUGAACCACU^  A-    U           G    C        UUUGA 
     110       100         90        80        70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
Wh
Mature sequence

Laf-Mir-505-v2_5p
mirBase accessionNone
Sequence 
0- GGAGCCAGGAAGUAUUGAUGUU -22
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Co-mature sequence

Laf-Mir-505-v2_3p
mirBase accessionNone
Sequence 
35- CGUCAACACUUGCUGGUUUCCU -57
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