| MirGeneDB ID | Laf-Mir-505-v2 |
|---|---|
| Family name | MIR-505 (all species) |
| Seed | GAGCCAG |
| Species | African bush elephant (Loxodonta africana) |
| MiRBase ID | |
| Paralogues | Laf-Mir-505-v1 |
| Orthologues | Bta-Mir-505-v2 Cfa-Mir-505-v2 Cja-Mir-505 Cpo-Mir-505-v2 Dno-Mir-505-v2 Eca-Mir-505-v2 Ete-Mir-505-v2 Hsa-Mir-505-v2 Mml-Mir-505-v2 Mmr-Mir-505-v2 Mmu-Mir-505-v2 Ocu-Mir-505-v2 Pab-Mir-505-v2 Rno-Mir-505-v2 |
| Node of Origin (locus) | Eutheria |
| Node of Origin (family) | Eutheria |
| Genome context (GCA_000001905.1_Loxafr3.0) |
GL010116.1: 1375954-1376010 [+] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | CUGCCGGUAGUAAAUGAUGCGCCCAGUGGGGGAGCCAGGAAGUAUUGAUGUUUCUGCCAGUUUAGCGUCAACACUUGCUGGUUUCCUCUCUGGAGCAUCACCAAGUUCGUGGAUUUUGet precursor sequence |
| Structure | 10 20 30 40 50 CUGCCGGUAGUAAAUGA---| GC U G A UCUGC UGC CCAG GGGGGAGCCAG AAGU UUGAUGUU \ ACG GGUC CUCCUUUGGUC UUCA AACUGCGA C UUUUAGGUGCUUGAACCACU^ A- U G C UUUGA 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | No |
| Motifs | No |
| Mature sequence | Laf-Mir-505-v2_5p |
| mirBase accession | None |
| Sequence |
0- GGAGCCAGGAAGUAUUGAUGUU -22
Get sequence
|
| Co-mature sequence | Laf-Mir-505-v2_3p |
| mirBase accession | None |
| Sequence |
35- CGUCAACACUUGCUGGUUUCCU -57
Get sequence
|
