MirGeneDB 3.0
MirGeneDB ID

Bta-Mir-505-v2

Family name MIR-505 (all species)
Seed GGAGCCA
Species Cow (Bos taurus)
MiRBase ID bta-mir-505
Paralogues Bta-Mir-505-v1 
Orthologues Cfa-Mir-505-v2  Cja-Mir-505  Cpo-Mir-505-v2  Dno-Mir-505-v2  Eca-Mir-505-v2  Ete-Mir-505-v2  Hsa-Mir-505-v2  Laf-Mir-505-v2  Mml-Mir-505-v2  Mmr-Mir-505-v2  Mmu-Mir-505-v2  Ocu-Mir-505-v2  Pab-Mir-505-v2  Rno-Mir-505-v2 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCF_002263795.1_ARS-UCD1.2_BTA)		 NW_020192292.1: 5196477-5196535 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-505-v2)		 Mir-505-v1 NW_020192292.1: 5196477-5196535 [+] UCSC Ensembl
Mir-505-v2 NW_020192292.1: 5196477-5196535 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CUGCGGGUGAUAAAUUGAUGCACCCAGUGGGGGAGCCAGGAAGUAUUGAUGUUUCUACCAGUUUAGCGUCAACACUUGCUGGUUUCCUCUCUGGAGCGUCACUGAAUUCGUGGAUUUUC
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Structure
        10           20        30        40        50         
CUGCGGGUGAUAAAUUG---|   AC    U           G    A       UUCUAC 
                    AUGC  CCAG GGGGGAGCCAG AAGU UUGAUGU      \
                    UGCG  GGUC CUCCUUUGGUC UUCA AACUGCG      C
CUUUUAGGUGCUUAAGUCAC^   A-    U           G    C       AUUUGA 
       110       100         90        80        70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
Ad Bo Br Ce Co Co De Fe He Hy Ir Ki La Lo Mi No Op Or Pe Re Su Te
Mature sequence

Bta-Mir-505-v2_5p
mirBase accessionNone
Sequence 
0- GGGAGCCAGGAAGUAUUGAUGU -22
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Co-mature sequence

Bta-Mir-505-v2_3p
mirBase accessionMIMAT0009341
Sequence 
37- GUCAACACUUGCUGGUUUCCUC -59
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Proposed targets TargetScanVert: bta-miR-505