MirGeneDB 3.0
MirGeneDB ID

Rno-Mir-505-v2

Family name MIR-505 (all species)
Seed UCAACAC
Species Norway rat (Rattus norvegicus)
MiRBase ID rno-mir-505
Paralogues Rno-Mir-505-v1 
Orthologues Bta-Mir-505-v2  Cfa-Mir-505-v2  Cja-Mir-505  Cpo-Mir-505-v2  Dno-Mir-505-v2  Eca-Mir-505-v2  Ete-Mir-505-v2  Hsa-Mir-505-v2  Laf-Mir-505-v2  Mml-Mir-505-v2  Mmr-Mir-505-v2  Mmu-Mir-505-v2  Ocu-Mir-505-v2  Pab-Mir-505-v2 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(rn6)		 chrX: 143517017-143517075 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-505-v2)		 Mir-505-v1 chrX: 143517017-143517075 [-] UCSC Ensembl
Mir-505-v2 chrX: 143517017-143517075 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CCUCCAGUAGUAAAUUGAUGCACCCAGUGGGGGAGCCAGGAAGUAUUGAUGUUUCUGCCAGGUUAGCGUCAACACUUGCUGGUUUCCUCUCUGGAGUAUCACCAAGUUCGUGGAUUCUA
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Structure
        10           20        30        40        50         
CCUCCAGUAGUAAAUUG---|   AC    U           G    A       UUCUGC 
                    AUGC  CCAG GGGGGAGCCAG AAGU UUGAUGU      \
                    UAUG  GGUC CUCCUUUGGUC UUCA AACUGCG      C
AUCUUAGGUGCUUGAACCAC^   A-    U           G    C       AUUGGA 
       110       100         90        80        70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
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Star sequence

Rno-Mir-505-v2_5p*
mirBase accessionMIMAT0017226
Sequence 
0- GGGAGCCAGGAAGUAUUGAUGU -22
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Proposed targets TargetScanVert: rno-miR-505-5p
miRDB: MIMAT0017226
Mature sequence

Rno-Mir-505-v2_3p
mirBase accessionMIMAT0003380
Sequence 
37- GUCAACACUUGCUGGUUUCCUC -59
Get sequence
Proposed targets microrna.org: MIMAT0003380
TargetScanVert: rno-miR-505-3p
miRDB: MIMAT0003380