MirGeneDB 3.0
MirGeneDB ID

Dno-Mir-330-v2

Family name MIR-330 (all species)
Seed CAAAGCA
Species Nine-banded armadillo (Dasypus novemcinctus)
MiRBase ID dno-mir-330
Paralogues Dno-Mir-330-v1 
Orthologues Bta-Mir-330-v2  Cfa-Mir-330  Cja-Mir-330-v2  Cpo-Mir-330-v2  Eca-Mir-330-v2  Ete-Mir-330-v2  Hsa-Mir-330-v2  Laf-Mir-330  Mml-Mir-330-v2  Mmr-Mir-330-v2  Mmu-Mir-330-v2  Ocu-Mir-330-v2  Pab-Mir-330-v2  Rno-Mir-330-v2 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(dasNov3)		 JH580665: 363522-363585 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-330-v2)		 Mir-330-v1 JH580665: 363522-363585 [+] UCSC Ensembl
Mir-330-v2 JH580665: 363522-363585 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CGUGCUGUGUGAUCUUGGGCGAUCACUGCCUCUCUGGGCCUGUGUCUUAGGCUCUGCAAGAUCAACCGAGCAAAGCACACGGCCUGCAGAGAGCCAGCGCUGCGCUCCUAGCGGCCCGCGGGGC
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Structure
        10         20         30          40         50        60 
CGUGCUGUGUGAUCUUG-    AUCA-   C       --    -|   U   AG    UGCAAG 
                  GGCG     CUG CUCUCUG  GGCC UGUG CUU  GCUC      \
                  UCGC     GAC GAGAGAC  CCGG ACAC GAA  CGAG      A
CGGGGCGCCCGGCGAUCC    GUCGC   C       GU    C^   -   A-    CCAACU 
  120       110       100        90        80          70
Deep sequencing
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3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
-   +
To
Star sequence

Dno-Mir-330-v2_5p* (predicted)
mirBase accessionMIMAT0047811
Sequence 
0- UCUCUGGGCCUGUGUCUUAGGCUC -24
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Mature sequence

Dno-Mir-330-v2_3p (predicted)
mirBase accessionMIMAT0047812
Sequence 
39- GCAAAGCACACGGCCUGCAGAGAGC -64
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