MirGeneDB 2.1
MirGeneDB ID

Hsa-Mir-330-v2

Family name MIR-330 (all species)
Seed CAAAGCA
Species Human (Homo sapiens)
MiRBase ID hsa-mir-330
Paralogues Hsa-Mir-330-v1 
Orthologues Bta-Mir-330-v2  Cfa-Mir-330-v2  Cpo-Mir-330-v2  Dno-Mir-330-v2  Ete-Mir-330-v2  Mml-Mir-330-v2  Mmu-Mir-330-v2  Ocu-Mir-330-v2  Rno-Mir-330-v2 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(hg38)		 chr19: 45639007-45639070 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-330-v2)		 Mir-330-v1 chr19: 45639007-45639070 [-] UCSC Ensembl
Mir-330-v2 chr19: 45639007-45639070 [-] UCSC Ensembl
Mir-642 chr19: 45674943-45674999 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CGUGCUGUGUGAUCUUUGGCGAUCACUGCCUCUCUGGGCCUGUGUCUUAGGCUCUGCAAGAUCAACCGAGCAAAGCACACGGCCUGCAGAGAGGCAGCGCUCUGCCCCUUACUCGGCCCCGUUU
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Structure
        10         20         30          40         50        60 
CGUGCUGUGUGAUCUUU-   -  UCA           --    -|   U   AG    UGCAAG 
                  GGC GA   CUGCCUCUCUG  GGCC UGUG CUU  GCUC      \
                  CCG CU   GACGGAGAGAC  CCGG ACAC GAA  CGAG      A
UUUGCCCCGGCUCAUUCC   U  CGC           GU    C^   -   A-    CCAACU 
  120       110       100        90        80          70
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14)
Tissue expression
-   +
1- 1- 1- 1- 1- 1- 1- 1- 1- 1- 1- 1- 1- 2- 2- 2- 2- 2- 2- 2- 2- 2- 2- 2- 3- 3- 3- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 5- 5- 5- 5- 5- 5- 5- 6- 6- 6- 6- 6-
Star sequence

Hsa-Mir-330-v2_5p*
mirBase accessionMIMAT0004693
Sequence 
0- UCUCUGGGCCUGUGUCUUAGGCUC -24
Get sequence
Proposed targets microrna.org: MIMAT0004693
TargetScanVert: hsa-miR-330-5p
TargetMiner: hsa-miR-330-5p
miRDB: MIMAT0004693
Mature sequence

Hsa-Mir-330-v2_3p
mirBase accessionMIMAT0000751
Sequence 
39- GCAAAGCACACGGCCUGCAGAGAGG -64
Get sequence
Proposed targets microrna.org: MIMAT0000751
TargetScanVert: hsa-miR-330-3p
TargetMiner: hsa-miR-330-3p
miRDB: MIMAT0000751