MirGeneDB 2.1
MirGeneDB ID

Dre-Mir-128-P2b

Family name MIR-128 (all species)
Seed CACAGUG
Species Zebrafish (Danio rerio)
MiRBase ID dre-mir-128-3
Paralogues Dre-Mir-128-P1  Dre-Mir-128-P2a 
Orthologues Aca-Mir-128-P2  Ami-Mir-128-P2  Bta-Mir-128-P2  Cfa-Mir-128-P2  Cli-Mir-128-P2  Cmi-Mir-128-P2  Cpi-Mir-128-P2  Cpo-Mir-128-P2  Dno-Mir-128-P2  Ebu-Mir-128  Ete-Mir-128-P2  Gga-Mir-128-P2  Gja-Mir-128-P2  Gmo-Mir-128-P2b  Hsa-Mir-128-P2  Lch-Mir-128-P2  Loc-Mir-128-P2  Mdo-Mir-128-P2  Mml-Mir-128-P2  Mmu-Mir-128-P2  Mun-Mir-128-P2  Oan-Mir-128-P2  Ocu-Mir-128-P2  Pbv-Mir-128-P2  Pma-Mir-128-o2  Rno-Mir-128-P2  Sha-Mir-128-P2  Spt-Mir-128-P2  Sto-Mir-128-P2  Tgu-Mir-128-P2  Xtr-Mir-128-P2 
Node of Origin (locus) Clupeocephala
Node of Origin (family) Vertebrata
Genome context
(danRer11)		 chrUn_KN150366v1: 5637-5693 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UGUGUGUGUGUGUGUCGGAGCGGCUGAAUGCGGGGCCGUGGCGCUGUCUGAGACGCUCUACUAUUCUCACAGUGAACCGGUCUCUUUUCCAGCCGCUCACACUCGACCAGAAGACCA
Get precursor sequence
Structure
        10          20        30        40        50         
UGUGUGUGUGUGUGUCG--|        AAUGC       UGG      CU    CGCUC 
                   GAGCGGCUG     GGGGCCG   CGCUGU  GAGA     \
                   CUCGCCGAC     CUCUGGC   GUGACA  CUCU     U
ACCAGAAGACCAGCUCACA^        CUUUU       CAA      --    UAUCA 
     110       100        90        80        70          60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Br Br Em Ey Gu Gu He Li Li Ov Te
Star sequence

Dre-Mir-128-P2b_5p*
mirBase accessionMIMAT0048666
Sequence 
0- CGGGGCCGUGGCGCUGUCUGAGA -23
Get sequence
Mature sequence

Dre-Mir-128-P2b_3p
mirBase accessionMIMAT0001824
Sequence 
36- UCACAGUGAACCGGUCUCUUU -57
Get sequence