MirGeneDB 2.1
MirGeneDB ID

Rno-Mir-128-P2

Family name MIR-128 (all species)
Seed CACAGUG
Species Norway rat (Rattus norvegicus)
MiRBase ID rno-mir-128-1
Paralogues Rno-Mir-128-P1 
Orthologues Aca-Mir-128-P2  Ami-Mir-128-P2  Bta-Mir-128-P2  Cfa-Mir-128-P2  Cli-Mir-128-P2  Cmi-Mir-128-P2  Cpi-Mir-128-P2  Cpo-Mir-128-P2  Dno-Mir-128-P2  Dre-Mir-128-P2a  Dre-Mir-128-P2b  Ebu-Mir-128  Ete-Mir-128-P2  Gga-Mir-128-P2  Gja-Mir-128-P2  Gmo-Mir-128-P2a  Gmo-Mir-128-P2b  Hsa-Mir-128-P2  Lch-Mir-128-P2  Loc-Mir-128-P2  Mal-Mir-128-P2a  Mdo-Mir-128-P2  Mml-Mir-128-P2  Mmu-Mir-128-P2  Mun-Mir-128-P2  Oan-Mir-128-P2  Ocu-Mir-128-P2  Pbv-Mir-128-P2  Pma-Mir-128-o2  Sha-Mir-128-P2  Spt-Mir-128-P2  Sto-Mir-128-P2  Tgu-Mir-128-P2  Tni-Mir-128-P2a  Xla-Mir-128-P2c  Xla-Mir-128-P2d  Xtr-Mir-128-P2 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(rn6)		 chr13: 44916548-44916603 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UAAUGGGCCUUGUUCCUGAGCUGUUGGAUUCGGGGCCGUAGCACUGUCUGAGAGGUUUACAUUUCUCACAGUGAACCGGUCUCUUUUUCAGCUGCUUCCUGACUUCUUUUUACUCA
Get precursor sequence
Structure
        10          20        30        40        50        
UAAUGGGCCUUGUUCCU--|   U      UUC       UAG      CU    GGUU 
                   GAGC GUUGGA   GGGGCCG   CACUGU  GAGA    U
                   UUCG CGACUU   CUCUGGC   GUGACA  CUCU    A
ACUCAUUUUUCUUCAGUCC^   U      UUU       CAA      --    UUAC 
    110       100        90        80        70          60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
-   +
Ad Ad Br Br Br Ce Ce Ce Ce Co Co Co Co Dr Dr Du Du Du Du He He Hi Hi Il Il Je Je Ki Ki Ki Ki Li Li Li Li Me Me Mu Mu Mu Mu Mu Mu Mu Mu Ov Pa Pa St St St Te Ut Wh Br Fa He Ki La Li Li Lu Mu Pa Sk Sm Sp St Te Th
Star sequence

Rno-Mir-128-P2_5p*
mirBase accessionMIMAT0017118
Sequence 
0- CGGGGCCGUAGCACUGUCUGAGA -23
Get sequence
Proposed targets TargetScanVert: rno-miR-128-1-5p
miRDB: MIMAT0017118
Mature sequence

Rno-Mir-128-P2_3p
mirBase accessionMIMAT0000834
Sequence 
35- UCACAGUGAACCGGUCUCUUU -56
Get sequence
Proposed targets microrna.org: MIMAT0000834
TargetScanVert: rno-miR-128-3p
miRDB: MIMAT0000834