MirGeneDB 3.0
MirGeneDB ID

Xtr-Mir-128-P2

Family name MIR-128 (all species)
Seed CACAGUG
Species Tropical clawed frog (Xenopus tropicalis)
MiRBase ID xtr-mir-128-1
Paralogues Xtr-Mir-128-P1 
Orthologues Aca-Mir-128-P2  Ami-Mir-128-P2  Bta-Mir-128-P2  Cfa-Mir-128-P2  Cja-Mir-128-P2  Cli-Mir-128-P2  Cmi-Mir-128-P2  Cpi-Mir-128-P2  Cpo-Mir-128-P2  Dno-Mir-128-P2  Dre-Mir-128-P2a  Dre-Mir-128-P2b  Ebu-Mir-128  Eca-Mir-128-P2  Ete-Mir-128-P2  Gga-Mir-128-P2  Gja-Mir-128-P2  Gmo-Mir-128-P2a  Gmo-Mir-128-P2b  Hsa-Mir-128-P2  Laf-Mir-128-P2  Lch-Mir-128-P2  Loc-Mir-128-P2  Mal-Mir-128-P2a  Mdo-Mir-128-P2  Mml-Mir-128-P2  Mmr-Mir-128-P2  Mmu-Mir-128-P2  Mun-Mir-128-P2  Neu-Mir-128-P2  Oan-Mir-128-P2  Ocu-Mir-128-P2  Pab-Mir-128-P2  Pbv-Mir-128-P2  Pma-Mir-128-o2  Rno-Mir-128-P2  Sha-Mir-128-P2  Spt-Mir-128-P2  Sto-Mir-128-P2  Tgu-Mir-128-P2  Tni-Mir-128-P2a  Xla-Mir-128-P2c  Xla-Mir-128-P2d 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(xenTro9_add)		 chr9: 78757421-78757477 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UCUGGUGCCGGGUGUUUGAGCGGCUGGAACCGGGCCCGGAGCGCUGUCUGAGAGGGUUUAAGUUUCUCACAGUGAACCGGUCUCUUUUUCAGUCUCUUCUAAUCUUCCUGAUCUCUC
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Structure
        10          20        30        40        50         
UCUGGUGCCGGGUGUUU--|  C        CC   C    AG      CU    GGGUU 
                   GAG GGCUGGAA  GGG CCGG  CGCUGU  GAGA     \
                   UUC CUGACUUU  CUC GGCC  GUGACA  CUCU     U
CUCUCUAGUCCUUCUAAUC^  U        UU   U    AA      --    UUGAA 
     110       100        90        80        70          60
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
-   +
An Br Em Em He Ve
Star sequence

Xtr-Mir-128-P2_5p*
mirBase accessionNone
Sequence 
0- CGGGCCCGGAGCGCUGUCUGAGA -23
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Mature sequence

Xtr-Mir-128-P2_3p
mirBase accessionMIMAT0003589
Sequence 
36- UCACAGUGAACCGGUCUCUUU -57
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Proposed targets TargetScanVert: xtr-miR-128