MirGeneDB 3.0
MirGeneDB ID

Eca-Mir-1271

Family name MIR-1271 (all species)
Seed UUGGCAC
Species Horse (Equus caballus)
MiRBase ID
Paralogues
Orthologues Bta-Mir-1271  Cfa-Mir-1271  Cpo-Mir-1271  Dno-Mir-1271  Ete-Mir-1271  Hsa-Mir-1271  Laf-Mir-1271  Mml-Mir-1271  Mmu-Mir-1271  Pab-Mir-1271  Rno-Mir-1271 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_002863925.1_EquCab3.0)		 CM009161.1: 4978545-4978602 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GCCUCUGUAUCCCCAGCACCCAGGUCAGCGCUUGGCACCUCGUAAGCACUCAGUAAAUACUUGUUGAGUGCCUGCUGUGUGCCAGGCAUUGUGCUGAGGGCUUUGGGGGGAUCCAGAG
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Structure
        10        20             30        40        50        
GCCUCUGUAUCCCCAGCA   AGG     -----|        CUC   A       GUAAA 
                  CCC   UCAGC     GCUUGGCAC   GUA GCACUCA     U
                  GGG   AGUCG     CGGACCGUG   CGU CGUGAGU     A
GAGACCUAGGGGGGUUUC   ---     UGUUA^        UGU   C       UGUUC 
      110       100           90        80        70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
Er Er Er Er Er Er Er Er Er Er Er Er Er Er Er Er Er Er Er Er
Mature sequence

Eca-Mir-1271_5p
mirBase accessionNone
Sequence 
0- CUUGGCACCUCGUAAGCACUCA -22
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Star sequence

Eca-Mir-1271_3p*
mirBase accessionNone
Sequence 
36- AGUGCCUGCUGUGUGCCAGGCA -58
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