MirGeneDB 3.0
MirGeneDB ID

Laf-Mir-1271

Family name MIR-1271 (all species)
Seed UUGGCAC
Species African bush elephant (Loxodonta africana)
MiRBase ID
Paralogues
Orthologues Bta-Mir-1271  Cfa-Mir-1271  Cpo-Mir-1271  Dno-Mir-1271  Eca-Mir-1271  Ete-Mir-1271  Hsa-Mir-1271  Mml-Mir-1271  Mmu-Mir-1271  Pab-Mir-1271  Rno-Mir-1271 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_000001905.1_Loxafr3.0)		 GL010028.1: 100492968-100493025 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CUCCCCUCUGCAUCAGCACCCAGGUCAGUACUUGGCACCUAGCGAGCACUCAGUAAGUACUUGUUGAGUGCCUGCUGUGUCCUAGGCACUGUGCUGAGGGCUUUGGGGGAUCCAGAAG
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Structure
        10        20          30        40        50        
CUCCCCUCUGCAUCAGCA   A-   -|   A     C  C     A       GUAAG 
                  CCC  GGU CAGU CUUGG AC UAGCG GCACUCA     U
                  GGG  UCG GUCA GGAUC UG GUCGU CGUGAGU     A
GAAGACCUAGGGGGUUUC   AG   U^   C     C  U     C       UGUUC 
      110       100        90        80        70        60
Deep sequencing
3' NTU Unknown
MotifsNo
Tissue expression
-   +
Wh
Mature sequence

Laf-Mir-1271_5p (predicted)
mirBase accessionNone
Sequence 
0- CUUGGCACCUAGCGAGCACUCA -22
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Star sequence

Laf-Mir-1271_3p* (predicted)
mirBase accessionNone
Sequence 
36- AGUGCCUGCUGUGUCCUAGGCA -58
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